| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3956 |
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| Symbol | |
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| ID | 1185631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4463752 |
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| End bp | 4464822 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395304 |
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| Product | membrane protein, PerM family |
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| Protein accession | NP_793722 |
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| Protein GI | 28871103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0628] Predicted permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAATG TGCTTCGCAA TTGGGTGCAA CGCTATTTCT CTGACGAGGA GGCGGTGGTA
CTGGCGGTCT TGCTGTTTGT GGCGTTTACC CTCGTCCTGA CGCTGGGCGG GATGCTCGCT
CCGGTGCTGG CCGGGCTGGT TCTGGCTTTT TTGATGCACG GGCTGGTCGG TCTTCTGGAG
CGCCTGCGGA TGCCCGAGGT GGCCGCAGTC GGCGTGGTGT TCACGTTGTT CATCGGCGCG
CTGCTGGTGT TTCTGCTGGT GCTGGTGCCG TTGCTCTGGC ATCAGTTGAT CACGCTGTTC
AACGAGGCGC CGGGCATGCT TGCCAAATGG CAGTCGGTGC TGCTGTTGCT GCCCGAGCGC
TACCCGCATC TGGTTTCCGA CGAGCAAGTG CTGCTGGCAA TTGAAGTCGC CCGTGGCGAG
GTCGGCAAGA TCGGCCAGCT GGCACTGACG TTCTCGATCT CCAGCCTGCC GTTGCTGGTC
AACCTGATGA TCTATCTGGT GCTGGTGCCG ATTCTGGTGT TCTTCTTCCT CAAGGATCGC
CATGTGATCG GTCGCTGGGC GCGTGGCTAT CTGCCTCGCG AGCGTGCGTT GCTCAATCGG
GTGGCGGACG AGATGAAGCG CCAGATTGCC AATTACATTC GCGGCAAGGT CATCGAGATC
TTCATCTGTG GCGGCGTGAC CTACATCGCC TTCGTGGCGC TCGGGCTCAA TTACGCCGCG
CTGCTGGCAA TGCTGGTGGG CATCTCGGTG GTGGTGCCTT ATGTCGGCGC GGTGGTGGTC
ACGGTGCCGG TGGCGCTGAT CGGTCTGTTC CAGTGGGGCT GGAGTGATCA ATTCATCTAC
CTGATGATTG CTCACGGTGT CATTCAGGCG CTGGATGGCA ACGTTCTGGT GCCGCTGCTG
TTTTCCGAAG CCGTCAATCT GCACCCGGTC GCGATCATCT GCGCCGTGTT GCTGTTCGGC
GGGCTGTGGG GCTTCTGGGG GATCTTCTTT GCGATTCCGC TGGCGACCCT GTTCAAGGCC
GTGCTGGATG CCTGGCCACG CAATGAGCCC ACCGTAGCGC CGCTGCTTTA G
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| Protein sequence | MFNVLRNWVQ RYFSDEEAVV LAVLLFVAFT LVLTLGGMLA PVLAGLVLAF LMHGLVGLLE
RLRMPEVAAV GVVFTLFIGA LLVFLLVLVP LLWHQLITLF NEAPGMLAKW QSVLLLLPER
YPHLVSDEQV LLAIEVARGE VGKIGQLALT FSISSLPLLV NLMIYLVLVP ILVFFFLKDR
HVIGRWARGY LPRERALLNR VADEMKRQIA NYIRGKVIEI FICGGVTYIA FVALGLNYAA
LLAMLVGISV VVPYVGAVVV TVPVALIGLF QWGWSDQFIY LMIAHGVIQA LDGNVLVPLL
FSEAVNLHPV AIICAVLLFG GLWGFWGIFF AIPLATLFKA VLDAWPRNEP TVAPLL
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