Gene PSPTO_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3955 
Symbol 
ID1185630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4463212 
End bp4463685 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content56% 
IMG OID637395303 
ProductAhpC/Tsa family protein 
Protein accessionNP_793721 
Protein GI28871102 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.888596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTTA CAGTAGATCA ACCGGTTCCC GATTTTCAGG CACCTGCTAC CAGCGGACAG 
ACGGTAGAGC TGTCTGCGTT CAAGGGTCAG CAGGTCGTGA TTTATTTCTA CCCCAAGGAC 
AACACGCCCG GCTGCACCAC GCAGGGTCAG GACTTTCGCG ATCACATCGC TCAATTCCAG 
GCAGCCAACA CTGTGGTACT GGGCGTTTCC CGCGACAGCC TGAAAACCCA CGAGAACTTC 
AAGGCCAAGC AGTCATTTCC GTTCGAGCTG ATCTCGGACA AGGAAGAAGC GCTTTGCCAG 
CTGTTCGACG TGATCAAGCT GAAAAAGCTT TATGGCAAGG AATACCTGGG CGTTGATCGC 
AGCACGTTCC TGATCGACAA GGAAGGCGTG TTGCGTGAGG AATGGCGCGG CGTGAAAGTG 
CCCGGCCATG TCGCTGATGT GCTGGCCAAG GCCCAAGCCC TTAACAAAGG CTGA
 
Protein sequence
MAVTVDQPVP DFQAPATSGQ TVELSAFKGQ QVVIYFYPKD NTPGCTTQGQ DFRDHIAQFQ 
AANTVVLGVS RDSLKTHENF KAKQSFPFEL ISDKEEALCQ LFDVIKLKKL YGKEYLGVDR 
STFLIDKEGV LREEWRGVKV PGHVADVLAK AQALNKG