| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3952 |
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| Symbol | |
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| ID | 1185627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4460298 |
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| End bp | 4461416 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395300 |
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| Product | lipoprotein, putative |
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| Protein accession | NP_793718 |
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| Protein GI | 28871099 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3317] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0490104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGAT TGGCCGGACT ATCCGCACTT GCTCTTATTA TCTCCAGCAC CAGCGGTTGC
GGTTGGCTCT GGGGTGAAGA TGGCTACTTC CGTGATCGCG GTAGCGATTA CCTTCAGGCA
ACCCAGACCC CTCCCATGCA GGTGCCTGCC GATGTTTCCG GCGTCAAGCG CCTGGATCCG
TTGTTGCCGA TCCCGCGTAA CGTGGCTGAC AGCACCCAGA AAGACGGTGA ATACACCGTT
CCTCGTCCTC TGCCGCTGGC CTCGACGTCC GAGTCGAGTG ATTTCAGCTT GCAGAAGAGC
GGTGATTCGC ACTGGATTCT GGCCCAGCGC CAGCCAGCCG AAGTCTGGCC GGTGGCCCAC
CAGTATTTTG AAGACAATGG TTTTCGCATC GCTGAAGAGC GTCCGCAGAC GGGCGAATTC
AGCTCTTCGT GGCAGCGTCT TGATGAGCTA TCTGCCTCGG TGGCCAAGCG TCTGAGCGCG
GCGGGTGTCG CGGCCGACGC AGAAACCCGT GTGCGGGTTC GCATCGAGCC AGGCGTGCAG
CGCAACACCA GCGAAGTTTA CGTGGTCAGC GTCGAGCGTC CTGCCGGCAG CACGGCCGAT
GTGGCGTTCC CGACACGCAC CACCAACCTG GGGCTCGATG CAGCACTGAC CGATGACCTG
CTGGCCAGCA TGGGCCGCAA CGCCGAGAAG GGCGGTTCGA TTTCCCTGCT GGCAGCGCGT
GACTACGATA CCCCGAGCCG TGTTGCCTTG AGCGAAGACG GCAGCGGCAA CCCGGTCTTG
AACCTCGGTG CCGATCTGGA CCGTGCGTGG TCGAGCGTCG GCCGTGCGCT GGATCAGGGC
GACTGGCGTG TCGAGGACAT CAACCGTAGC CTGGGCCTGT ACTACATCAA CCTGGCCGAA
AAAGCCAAAA CGCCTGAGAA CGAGCCTGGT TTCTTCGGTC GCATGTTCGG CAGCAAGTCG
AGCAAGGAAG AGATCGATGC CCGCGCCGAG CGTTATCAGG TGCGCCTGAG CAAGGTCGGT
GACAACGTTC AGGTGACCGT CGAGAAGAAC ATCAACACTG TTGCACCTGC GGATATCGCT
CGTCGGGTGT TGAGCGTTAT TCAAGATAAC CTGGGTTAA
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| Protein sequence | MKRLAGLSAL ALIISSTSGC GWLWGEDGYF RDRGSDYLQA TQTPPMQVPA DVSGVKRLDP
LLPIPRNVAD STQKDGEYTV PRPLPLASTS ESSDFSLQKS GDSHWILAQR QPAEVWPVAH
QYFEDNGFRI AEERPQTGEF SSSWQRLDEL SASVAKRLSA AGVAADAETR VRVRIEPGVQ
RNTSEVYVVS VERPAGSTAD VAFPTRTTNL GLDAALTDDL LASMGRNAEK GGSISLLAAR
DYDTPSRVAL SEDGSGNPVL NLGADLDRAW SSVGRALDQG DWRVEDINRS LGLYYINLAE
KAKTPENEPG FFGRMFGSKS SKEEIDARAE RYQVRLSKVG DNVQVTVEKN INTVAPADIA
RRVLSVIQDN LG
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