Gene PSPTO_3933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3933 
Symbol 
ID1185607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4446042 
End bp4446575 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content62% 
IMG OID637395283 
Productlysozyme, putative 
Protein accessionNP_793702 
Protein GI28871083 
COG category[R] General function prediction only 
COG ID[COG3179] Predicted chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.481436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCATCA CCGCAGAGCA GTTGCTGAAG ATCCTCCCGA ACGCCGGCCA GAGAGCCGGC 
GTTTTTGTTC CAGCCCTGAA CACCGCCATG GGCAAATACC AGATCATCAC CCGAGAGCGC
ATCACTGCGT TCCTCGCCCA GATCGGTCAT GAGTCTGGCC AGTTGCGTTA CGTCCGCGAG
ATTTGGGGGC CTACGTCTCA GCAGCTGGGT TATGAAGGCC GCAAGGACCT CGGCAATACC
GTGGCGGGTG ATGGTTCGAA GTACCGCGGG CGCGGCCTGA TCCAGATCAC CGGCCGGGCC
AACTATGCCG AATGCGGCGA GGCGCTGGGC CTGGATCTGA TCAACCATCC CGAATTGCTC
GAGCTGGCGC AGTACGCCGC GATGTCTGCG GCGTGGTTCT GGCACCGGGC AGCGCTGAAT
GCGTTGGCCG ACAAAGGCGA CTTTCTGACC ATCACCAAGC GCATCAACGG CGGCACGAAC
GGTCTCGCCG ATCGGCAGGC GTTGTACGCC CGAGCGCTTG AGGTGTTGGC ATGA
 
Protein sequence
MPITAEQLLK ILPNAGQRAG VFVPALNTAM GKYQIITRER ITAFLAQIGH ESGQLRYVRE 
IWGPTSQQLG YEGRKDLGNT VAGDGSKYRG RGLIQITGRA NYAECGEALG LDLINHPELL
ELAQYAAMSA AWFWHRAALN ALADKGDFLT ITKRINGGTN GLADRQALYA RALEVLA