| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3933 |
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| Symbol | |
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| ID | 1185607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4446042 |
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| End bp | 4446575 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395283 |
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| Product | lysozyme, putative |
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| Protein accession | NP_793702 |
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| Protein GI | 28871083 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3179] Predicted chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.481436 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCATCA CCGCAGAGCA GTTGCTGAAG ATCCTCCCGA ACGCCGGCCA GAGAGCCGGC
GTTTTTGTTC CAGCCCTGAA CACCGCCATG GGCAAATACC AGATCATCAC CCGAGAGCGC
ATCACTGCGT TCCTCGCCCA GATCGGTCAT GAGTCTGGCC AGTTGCGTTA CGTCCGCGAG
ATTTGGGGGC CTACGTCTCA GCAGCTGGGT TATGAAGGCC GCAAGGACCT CGGCAATACC
GTGGCGGGTG ATGGTTCGAA GTACCGCGGG CGCGGCCTGA TCCAGATCAC CGGCCGGGCC
AACTATGCCG AATGCGGCGA GGCGCTGGGC CTGGATCTGA TCAACCATCC CGAATTGCTC
GAGCTGGCGC AGTACGCCGC GATGTCTGCG GCGTGGTTCT GGCACCGGGC AGCGCTGAAT
GCGTTGGCCG ACAAAGGCGA CTTTCTGACC ATCACCAAGC GCATCAACGG CGGCACGAAC
GGTCTCGCCG ATCGGCAGGC GTTGTACGCC CGAGCGCTTG AGGTGTTGGC ATGA
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| Protein sequence | MPITAEQLLK ILPNAGQRAG VFVPALNTAM GKYQIITRER ITAFLAQIGH ESGQLRYVRE
IWGPTSQQLG YEGRKDLGNT VAGDGSKYRG RGLIQITGRA NYAECGEALG LDLINHPELL
ELAQYAAMSA AWFWHRAALN ALADKGDFLT ITKRINGGTN GLADRQALYA RALEVLA
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