| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3930 |
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| Symbol | |
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| ID | 1185603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4443121 |
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| End bp | 4444302 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637395280 |
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| Product | retron reverse transcriptase |
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| Protein accession | NP_793699 |
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| Protein GI | 28871080 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.772371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGAAGG ACAAGCCTTA TTATCCTCAT GCATCCATCG GTTCTGTGGC CATGTTGGCT
AAGACGCTGG GTGTGCATCC AAAGCTGCTT AATGATCTGG CGGGACGGGC GACCGATTCA
TATACTCATT TTGTCATTAG GACGAAAGGA GATAAGGAGC GGAACGTCTA TGAACCAAAG
TATGAGCTTA AGAAGCTTCA AAAGAGAATA AACTCAAGAC TCTTTGAAAA GGTCCATTAC
CCTTTCTATC TACAAGGTGG GGTCAGAGAC GAGGATCATC CTCGCGACTA TATCGAGAAT
AGTCGAATTC ATGCCGGCTC AAAATCTTTA ATTAGTCTAG ATATTCGAAA TTTCTACGAT
AATATTCCTT ATGAAAGCGT TGTAAGTATT TTCAAGTATT TTTTTAATTT TCCCGATGAA
GTTAGTGATC TCTTGTCTAA GATAGTTACT AGAGATGGAA AAGTTCCACA AGGTGCGTGC
ACGTCTAGCT ACGTAGCTAA TCTAATATTT CACAATTCTG AGTATAACTT TGTTTCAAGG
CTGAGAAATC AAGGTGTTAC ATACTCCCGT CTTCTGGATG ATGTGACGCT ATCGTCAAGT
AGGTTACTTT CTCAGGATGA AGTCAGTGGC TACATAAAAT ATGTCGCCGG GCTGTTTAGT
GAACATAAGT TACGCATTAA AAAAAGTAAG ACGAAGATCG AGCGGTCTGA CGATTTATCG
GCTGAATATA CTGTCACAGG TGTATGGGTA GGGCACGGTG TCCCAAAAAT TCGGCGTGCT
GAGAGAGATT TGATTCGGCA CTCCGTCTAT ATCTGTGAGC GAGAGTATCA GAAGGACAGG
TTTCGGGATG AATATCACGA GCTTTGGAAT AAAGTTTCAG GACAGGTTGC TAAACTAACG
AGGCTTGAGC ATTCTCAAGC TTTAAAGTTG CGTGCCCGGA TGAGAGATAT ACTTCCCCTC
TATGACGGTA AGGCAACAGC CGCAATTATT CGTGAAGCGG ATTTGCTATT AAAGCGGCCT
AGAACGAGTC ATGTAAAAGT TTCTGTGGTT AACGCTTATC GGAGATTGAT TAATAGGCTT
GGAATCCTGA CAAGGACCAA CAAAACGCTG GCAAGGGGTC TTAGGCGTCA GTTGAAGACC
AAATTTTCCG ACGTTCCATC AAAGGTATTG ATGTGGGAGT GA
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| Protein sequence | MAKDKPYYPH ASIGSVAMLA KTLGVHPKLL NDLAGRATDS YTHFVIRTKG DKERNVYEPK
YELKKLQKRI NSRLFEKVHY PFYLQGGVRD EDHPRDYIEN SRIHAGSKSL ISLDIRNFYD
NIPYESVVSI FKYFFNFPDE VSDLLSKIVT RDGKVPQGAC TSSYVANLIF HNSEYNFVSR
LRNQGVTYSR LLDDVTLSSS RLLSQDEVSG YIKYVAGLFS EHKLRIKKSK TKIERSDDLS
AEYTVTGVWV GHGVPKIRRA ERDLIRHSVY ICEREYQKDR FRDEYHELWN KVSGQVAKLT
RLEHSQALKL RARMRDILPL YDGKATAAII READLLLKRP RTSHVKVSVV NAYRRLINRL
GILTRTNKTL ARGLRRQLKT KFSDVPSKVL MWE
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