Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3923 |
Symbol | |
ID | 1185596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4436285 |
End bp | 4437928 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637395275 |
Product | hypothetical protein |
Protein accession | NP_793694 |
Protein GI | 28871075 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.107021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATAA TGAGAACTGT TCGCCCAGAG GTTGTAACTC TATTTGTCAG CGGTTTACTG TTGTTGGGCT TCAATATCAA TCTGTGGCAG CATTTATTCG CAATTACCAG TGGCGATGGC AAAGGCCTGG CCATGCGCTT TGCCTTCGGC TTGATGATTT TCTGTGTATT CAATATTTTT TTGACGCTGT TGGCGTTCCG TCGTGTGTTT AAACCTGTGG TGATCTTTCT GTTTATGGTC AGCGCCAGTG TGGTTTATTT CATGACCGAA TACGGCGTCA TGATTGACGC CGGTATGTTC CGAAACTTTG CCGAAACCAA CGTGACTGAA GTTCAGGGGC TGTTGTCTTT GAAACTGGTC GTGTACATCG CTTTGTTGGG TGTGCTGCCG TCGCTGATTC TGTGGAAACT GCCGATCAGT TATCGCCGCT GGCACCTGGA GCTGTTCAGC AAGCTGGTGG TTATTGTGGT CTGTAGTGTG GCCATCGGCG GCGTGGCATT GGCGAACTAT CAGGGGTTGT CCTCGTTGTT TCGCAATCAC CACGAATTGC GTCTGATGGT CGTGCCGAGC AACTACATGG GTGCCTCGAT CGGCTACCTG AGCGAACAGG TCATCTCGGC ACAGCGCCCA TTCGTCAAGA TTGGCGAAGA CGCCAAACGC TCGCCGGACT GGGCCACGCA TGCCCGCAAA TCACTGACGG TGCTGGTCGT GGGCGAGAGC GCCCGGGCGG AAAACTTCGG GATCCTGGGT TATGGTCGCA ATACCACGCC TAACTTGAAC AAAGAGAACG GGCTGGTCGC GTTTACCGAT GTTTATTCAT GCGGTACTGA AACAGCGGTG TCGGTGCCTT GCATGTTTTC CAACATGGGG CGCAAGAACT ACAACGCAAC CAAGGCCCGT AATCAGGAAG GCTTGCTTGA TGTGCTGAAA CATGCGGGTA TAGAAGTGGC GTGGCGTGAC AATCAGTCGG GTTGCAAAGG CACCTGTGAC AGGGTGACGT TCCAGGACGT GAGCAATCTC ACGGACCCGC TGCTATGCAA CAGTCATGAA TGCCGGGATG AGATCCTGTT GCAAAACCTG CAGGGCTTTA TCGACAGTCT CGACAAGGAC ACCGTTCTTG TCCTGCACCA GATGGGCAGT CACGGGCCGG AATATTACAA GCGCTACCCA AAAGAGTTTG AAAAGTTTAC CCCGGTGTGT GAAAGCAATG CGCTGAACAA TTGCAGCCGG GACAGCATCG TCAATGCCTA CGACAATACG TTGCTGTATA CCGACCATGT GCTGTCCACA CTGATTGACC TGTTGCGCAG TAATCAGGCC AAGGTTGATA CGGCAATGGT GTACCTGTCG GATCATGGCG AATCCCTTGG CGAGTACAAC TTGTTCCTGC ACGGCACCCC CTATGTACTG GCGCCAGATC AACAGAAGCA TGTGCCCATG CTGATCTGGT TGTCCGATAC CTATCAGAAG TCTTTCGCCG TCACGCCGGA CTGTCTTGCC AAACAGCGCA ACGCGCCACT GAGCCAGGAC AATCTTTTTC ACTCCATGCT CGGCCTGTTG AAAGTCGATA CCAAGGTCTA TGACCCGAGT CTGGATATGT TTGCCGGGTG CCGTAGTGAG CTGGCGGCGG CTGACAAGCA ATGA
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Protein sequence | MPIMRTVRPE VVTLFVSGLL LLGFNINLWQ HLFAITSGDG KGLAMRFAFG LMIFCVFNIF LTLLAFRRVF KPVVIFLFMV SASVVYFMTE YGVMIDAGMF RNFAETNVTE VQGLLSLKLV VYIALLGVLP SLILWKLPIS YRRWHLELFS KLVVIVVCSV AIGGVALANY QGLSSLFRNH HELRLMVVPS NYMGASIGYL SEQVISAQRP FVKIGEDAKR SPDWATHARK SLTVLVVGES ARAENFGILG YGRNTTPNLN KENGLVAFTD VYSCGTETAV SVPCMFSNMG RKNYNATKAR NQEGLLDVLK HAGIEVAWRD NQSGCKGTCD RVTFQDVSNL TDPLLCNSHE CRDEILLQNL QGFIDSLDKD TVLVLHQMGS HGPEYYKRYP KEFEKFTPVC ESNALNNCSR DSIVNAYDNT LLYTDHVLST LIDLLRSNQA KVDTAMVYLS DHGESLGEYN LFLHGTPYVL APDQQKHVPM LIWLSDTYQK SFAVTPDCLA KQRNAPLSQD NLFHSMLGLL KVDTKVYDPS LDMFAGCRSE LAAADKQ
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