| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3920 |
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| Symbol | |
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| ID | 1185593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4433652 |
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| End bp | 4434584 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395272 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase family protein |
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| Protein accession | NP_793691 |
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| Protein GI | 28871072 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTTC TGATTGCCGA GCACGATTAC CTCGTTTACA CCCAATTGTT GCGCAAGGCT
GCGCCTGACC TGGAAGTCTT GAGCACCGGC GACTCTGCCG AGCTATCGCG GCTGGCCAGC
GACTGCCCGA TCTGGCTGGG GCAGCCGGAC CTGATGGCCA ATCTGCTGCG CCAGGGGCAC
AAGCCACAAT GGCTGCAATC CACTTGGGCG GGGATCACGC CACTGCTGGC CGACGGCCTG
TCGCAGGATT ATCGCCTGAC GCGTGCCGTA GGGATTTTCG GTCAGGTCAT GGCCGAATTC
GTTTTGACCT ACATGCTCGG TCATGAGCGT GAGGTGCTGG CGCGCCTGAT GAGTCAGGTC
GAGCGCAAGT GGGACAGTCG CATTGGTCAG AGCCTGGCAG GTCGCAAGGT ACTGATCGTC
GGTGCCGGTG ATATCGGCCG TCGCGTTGCC GAGTTTCTGT TGCCATTCGG TGTGCAGGTC
TACGGCGTGG CATCCACGGC GCGAACCCAG GCGCCTTTCA TCGAAGTAAC CGCGTTGTCG
GACATGTCGC GTCTGATAGG CGACATGGAC TACGTCATCA ATCTGTTGCC CAACACGCCG
GATACCCACG ATCTGTATAA CGCGAAGCTG TTCGCCAGCT TCAAGCCAAC GGCGTTGTTC
ATCAACGTCG GGCGCGGTGT GGCGGTGGTG GATGCGGACC TGGTTGAAGC CTTGCGGGTG
GGGCATCTGG CGGGGGCGAT CATTGATGTC TGCCGTCAAG AGCCTTTGCC GCAGCGTCAT
CCGTTCTGGA CCGCATACGG TCTGCTGTTG ACCGGTCACA GTTCGGCGCC GACATCGCCG
GTGGCCATGA CCGAGCTTTT CGTCGATAAC CTGAAAGCTT TTCAGGATGG GGAAGCACTG
CGCGGCGAAG TGGATTTCTC GCGAGGTTAC TGA
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| Protein sequence | MRVLIAEHDY LVYTQLLRKA APDLEVLSTG DSAELSRLAS DCPIWLGQPD LMANLLRQGH
KPQWLQSTWA GITPLLADGL SQDYRLTRAV GIFGQVMAEF VLTYMLGHER EVLARLMSQV
ERKWDSRIGQ SLAGRKVLIV GAGDIGRRVA EFLLPFGVQV YGVASTARTQ APFIEVTALS
DMSRLIGDMD YVINLLPNTP DTHDLYNAKL FASFKPTALF INVGRGVAVV DADLVEALRV
GHLAGAIIDV CRQEPLPQRH PFWTAYGLLL TGHSSAPTSP VAMTELFVDN LKAFQDGEAL
RGEVDFSRGY
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