Gene PSPTO_3914 details

Gene Information

• Locus tag: PSPTO_3914
• Symbol: copA
• ID: 1185587
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4428608
• End bp: 4430377
• Gene Length: 1770 bp
• Protein Length: 589 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637395266
• Product: copper resistance protein A
• Protein accession: NP_793685
• Protein GI: 28871066
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2132] Putative multicopper oxidases
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence; [TIGR01480] copper-resistance protein, CopA family

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCACCC GAACATCAAG ACGCACCTTC GTGAAAGGGC TTGCCGCCAG CAGTATTCTG 
AGTGGGCTGG GGCTCTGGCG CAGCCCGGCG TGGGCACTCC CCAATCCGGG CCAGCCTGAC 
GGGTTGTCCG GCACCGAGTT CGACCTGACC ATCGGCGAAA CCCAGGTCAA TATCACCGGC 
AATGCCAGAA CCGCGATGAC TATCAACGGC GGCATTCCAG GCCCATTGTT GCGCTGGCGC 
GAGGGCGACA CTGTCACCCT GCGGGTAAAA AACCGCCTCG ACGAAACCAC CTCCATTCAC 
TGGCACGGCA TCATCCTGCC GGCCAACATG GACGGCGTGC CGGGGCTGAG CTTTGATGGC 
ATTGCGCCCG ACGGCATGTA TGTCTATCGC TTCAAAGTCA GGCAGCACGG CACGTATTGG 
TATCACAGCC ATTCAGGTTT TCAGGAGCAG TCGGGCGTCT ATGGGCCACT GGTGATCGAC 
GCCAAAGAAC CCGAGCCGTT CACCTACGAG CGCGAGCACG TGGTCATGCT CACCGACTGG 
GCAGACGAAG ACCCGGCCCG GGTGATGAAA AAGCTCAAGA AACAGTCGGA CTACTACAAC 
AATAACAAGC GCACCGTCGG CGACTTCATC AACGACGTCG GCGAAAAAGG CTGGAGCGCG 
ACCACCGCCG AGCGCTGGAT GTGGGCGCAG ATGAAGATGA ACCCGACTGA TCTGGCGGAC 
GTCAGCGGCG CAACCTACAC CTACCTGATG AACGGCCAGG CGCCAAACAT GAACTGGACC 
GGGCTGTTCA AACCCGGCGA GCAGATTCGC CTGCGCTTTA TCAACGGCTC GTCGATGACC 
TATTTCGATG TGCGCATTCC CGGCCTGAAG ATGACCGTGG TCGCCAGCGA CGGCCTGCAC 
ATCAAACCGG TGGTTGTCGA TGAACTGCGG ATCGCGGTGG CAGAGACATT CGACGTGATC 
GTCGAGCCGG CTGACGGTGC CTACACGCTG TTCGCCCAAT CGATGGACCG CACCGGCTTT 
GCCCGAGGCA CTTTAACCAG CAGGCCCGGC ATGCAGGCCG AGGTCCCGCC TCTCGACCCG 
CGTCCGCTGC TGAGCATGGA CGACATGGGC ATGGCGGGCA TGGATCACGG CAGCATGAAC 
CACAGCGCCA AGCCGGCAAT GGACGGTATG GACCACAGCA AGATGGACCA TGACTCGATG 
CCCGGCATGG ACCACGGCAC GATGCCGATG CAAGAAGCAC CGGTCATGCA GTCGCACCCG 
GACAGCGAAA GGAATAATCC GCTGGTCGAT ATGCAGGCCA TGAGCACGTC GGCAAAACTC 
AATGATCCGG GCATCGGCCT TCGGGACAAC GGCCGTAAGG TCCTGACCTA CGCCGACCTG 
CGCAGCACCT TCGAGGACCC GGACGGCCGT GAGCCGAGCC GGACAATCGA ACTGCACCTG 
ACCGGGCACA TGGAAAAATT CGCCTGGTCG TTCGATGGCG TGAAGTTCTC CGACGCCAAG 
CCACTGATGC TCAAGTACGG CGAGCGGGTG CGTATCGTGC TGGTCAACGA CACGATGATG 
ACTCACCCCA TTCACCTGCA CGGCATGTGG AGCGATCTGG AAGACGAAAA CGGTCAGTTC 
ATGGTGCGCA AACACACCAT CGACATGCCC CCGGGGTCAC GCCGCAGCTA CCGCGTCACC 
GCTGATGCTC TGGGCCGTTG GGCGTATCAC TGTCATATGC TGTACCACAT GGAAATGGGT 
ATGTTCCGCG AAGTGCGGGT GGAAGAATGA 

 

Protein sequence

MPTRTSRRTF VKGLAASSIL SGLGLWRSPA WALPNPGQPD GLSGTEFDLT IGETQVNITG 
NARTAMTING GIPGPLLRWR EGDTVTLRVK NRLDETTSIH WHGIILPANM DGVPGLSFDG 
IAPDGMYVYR FKVRQHGTYW YHSHSGFQEQ SGVYGPLVID AKEPEPFTYE REHVVMLTDW 
ADEDPARVMK KLKKQSDYYN NNKRTVGDFI NDVGEKGWSA TTAERWMWAQ MKMNPTDLAD 
VSGATYTYLM NGQAPNMNWT GLFKPGEQIR LRFINGSSMT YFDVRIPGLK MTVVASDGLH 
IKPVVVDELR IAVAETFDVI VEPADGAYTL FAQSMDRTGF ARGTLTSRPG MQAEVPPLDP 
RPLLSMDDMG MAGMDHGSMN HSAKPAMDGM DHSKMDHDSM PGMDHGTMPM QEAPVMQSHP 
DSERNNPLVD MQAMSTSAKL NDPGIGLRDN GRKVLTYADL RSTFEDPDGR EPSRTIELHL 
TGHMEKFAWS FDGVKFSDAK PLMLKYGERV RIVLVNDTMM THPIHLHGMW SDLEDENGQF 
MVRKHTIDMP PGSRRSYRVT ADALGRWAYH CHMLYHMEMG MFREVRVEE