Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3909 |
Symbol | |
ID | 1185582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4423780 |
End bp | 4424568 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395261 |
Product | hypothetical protein |
Protein accession | NP_793680 |
Protein GI | 28871061 |
COG category | [R] General function prediction only |
COG ID | [COG0121] Predicted glutamine amidotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGAAT TATTGGGCAT GAGCGCCAAT GTCCCGACCG ATATCGTTTT CAGCTTTACC GGGCTTATGC AGCGGGGCGG ACGTACCGGC CCGCACCGCG ACGGCTGGGG CATTGCCTTC TACGAGGGCC GTGGCCTGCG CCTGTTTCAG GACCCGGCCG CCAGCAGCGA GTCAGAAGTC GCGCAGTTGG TGCAGCGTTA TCCCATCAAG AGCGAAGTGG TGATTGGCCA TATCCGCCAG GCCAACGTCG GCAAGGTCTG CCTGTCCAAC ACCCATCCTT TCGTGCGTGA ACTCTGGGGC CGCAACTGGT GCTTTGCACA CAACGGCCAA CTGGCGGATT TCGCCCCCGC TGCCACGTTT TATCGGCCGG TGGGCGATAC CGACAGCGAA GCGGCATTCT GCGACCTGCT CAATCGCGTT CGTGAAGCCT TTCCCGAGCC GGTTGAAGTC GAACAATTAC TGCCCTCACT GATACAGGCC TGCACCGAAT ACCGTAGTAA AGGCGTGTTC AACTGCCTGT TGAGCGACGG TGACTGGTTG TTCTGCTTTT GCAGTACCAA ACTGGTGCAG ATCACCCGCC GCGCGCCGTT CGGGCCGGCA AGGTTGAAAG ATGTCGACGT GATTGTCGAT TTTCAGGCAG AAACAACGCC GCACGACGTG GTCACAGTTA TTGCCACCGA ACCTTTGACC GAGAACGAAA ACTGGAACCG CTACGAGCCG GGCCAGTGGA GCCTGTGGCG CAAGGGTGAG TGCGTGGCGA GTGGTTCGGT CGAAACGGCG GCGCAGTAA
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Protein sequence | MCELLGMSAN VPTDIVFSFT GLMQRGGRTG PHRDGWGIAF YEGRGLRLFQ DPAASSESEV AQLVQRYPIK SEVVIGHIRQ ANVGKVCLSN THPFVRELWG RNWCFAHNGQ LADFAPAATF YRPVGDTDSE AAFCDLLNRV REAFPEPVEV EQLLPSLIQA CTEYRSKGVF NCLLSDGDWL FCFCSTKLVQ ITRRAPFGPA RLKDVDVIVD FQAETTPHDV VTVIATEPLT ENENWNRYEP GQWSLWRKGE CVASGSVETA AQ
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