| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3898 |
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| Symbol | |
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| ID | 1185571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4409447 |
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| End bp | 4410394 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395250 |
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| Product | sodium/bile acid symporter family protein |
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| Protein accession | NP_793669 |
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| Protein GI | 28871050 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0385] Predicted Na+-dependent transporter |
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| TIGRFAM ID | [TIGR00841] bile acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0624185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCTT TGGCAGCCTT GAGTCGGTTT GTCGGTAATA CCTTTGCTTA CTGGGTGCTG
CTGTTCGCCA TCCTCGCATT CATGTTCCCG CAGGTTTTCA TCGGCCTGAA AGGCTGGATC
GTACCGCTGC TGGGGCTGGT CATGTTCGGC ATGGGCCTGA CCCTGAAGCT GGAAGACTTT
TCCGAGGTGG CGCGTAACCC GTGGCGCGTG GCGCTGGGTG TGGTCGCGCA CTTTGTCATC
ATGCCGGGCG TGGCGTGGTT GCTGTGTCAG GTGTTTCAGC TGCCACCGGA AATCGCCGTA
GGGGTGATTC TGGTCGGCTG CTGCCCAAGC GGTACGTCGT CCAATGTCAT GGCCTGGCTG
GCCAAGGGCG ATCTGGCACT GGCTGTCGCG ATTGCCGCGG TCACCACCCT GCTCGCCCCT
TTGCTGACTC CGACGCTGAT CTGGTTGCTG GCGTCGGCCT GGCTGCCAGT GTCATTTCTG
GATATGTTCT GGTCGATCCT GCAATTGGTC ATGCTGCCCA TTTTGCTTGG CGTGGTTGCG
CAGCGCCTGC TAGGTGCGCG GGTCCGCTAC GCCGTGGACG TGCTGCCGCT GGTTTCGGTG
GTGAGTATCG TGATGATCGT TTGCGCGGTG GTCGCCGCCA GCCAGGCGAA AATTGCCGAG
TCGGGCCTGC TGATCATGGC GGTGGTGATC CTGCACAATA CGTTTGGTTT TCTGCTGGGT
TATTTCACCG GCAAGGTTTT CAAGCTGCCA TTGGCGCAAC GCAAGTCACT GGCGCTGGAA
GTCGGCATGC AGAACTCCGG CCTGGGCGCG GCACTGGCCA GCGCACACTT CTCGCCATTG
GCGGCGGTGC CGAGTGCGCT GTTCAGTGTC TGGCACAATA TTTCCGGTGC GTTGCTGTCG
ACGTATTTCA GGAAGATGCC GGAGGAAGAG AATACGTCCG CTCGTTGA
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| Protein sequence | MRALAALSRF VGNTFAYWVL LFAILAFMFP QVFIGLKGWI VPLLGLVMFG MGLTLKLEDF
SEVARNPWRV ALGVVAHFVI MPGVAWLLCQ VFQLPPEIAV GVILVGCCPS GTSSNVMAWL
AKGDLALAVA IAAVTTLLAP LLTPTLIWLL ASAWLPVSFL DMFWSILQLV MLPILLGVVA
QRLLGARVRY AVDVLPLVSV VSIVMIVCAV VAASQAKIAE SGLLIMAVVI LHNTFGFLLG
YFTGKVFKLP LAQRKSLALE VGMQNSGLGA ALASAHFSPL AAVPSALFSV WHNISGALLS
TYFRKMPEEE NTSAR
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