| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3884 |
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| Symbol | |
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| ID | 1185555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4395399 |
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| End bp | 4396361 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395234 |
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| Product | oxidoreductase, zinc-binding protein |
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| Protein accession | NP_793655 |
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| Protein GI | 28871036 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGCAT TGCAAGGCGT TGAAGGACAT GTGGAATGGG TCGAGGAGCC AAGTCCGGCC
CTTGATGTGG GGCAGGTACG TATCAAAGTG GCTGCGGCGG GTTTGAATCG GGCCGATCTT
TTACAGCGTG CGGGGATGTA TCCGCCGCCG CCGGGCGTCA CCGCGACGCT GGGCCTGGAG
TGTTCGGGGG TGATCGCCGA AGTCGGTCCG GGCACCTCGT GGCTGGTCGG TGACCGCGTC
TGCGCGCTGT TGGCGGGCGG TGCGATGGCC GAGGAAGTGG TGGTTGACGG GCGGCATGTT
CTGCCGGTGC CGGAAGGCCT GACGCTGCAC GAGGCTGCCG CGATTCCCGA GGTGTACGCA
ACGGCATGGC TGAACCTGTT TCAGCTCGCC GGTTTGAAGC CGGGTGAAAA AGTATTGTTG
CACGCGGGCG CAAGTGGGGT TGGTTCAGCC GGTATTCAGC TTTGCAAAGC GTTCGGCAAC
CCGGTCTGGG TCAGCGTCGG CTCGACCGAG CGTCTGGCGT ATTGCGTCGA ACTGGGTGCG
CAGGGCGGTG TGGTGCGCAG CGAAAGCCTT GAGGGCCTGA ACGATTTTGC ACCGTTCAAC
GTCATCCTTG ACCCGGTCGG CGCCAATTAC GCCGAGCTCA ACGTCAAGCT GCTGGCTCTG
GACGGCCGTT GGGTGCTGAT TGGCATCATG AGCGGGCGTG AGGCCAAAGT GGACCTGGCG
CATGTGCTGG GCAAGCGCAT CCAGTTGATG GGCTCGACGT TGCGCAGTCG CGATGAGACG
TTCAAGGCCG ATCTGATCAG CGATCTGGGT CAGCACGTCT GGCCGCTGTT CACCGAAGGC
CGCTTAAAGC CGCAACTGGC AAAATCCTTT GCGATCAAGG ATGCCGAAGC GGCGTTCGAG
GAACTGGCGA CCAACAAGGT GTCCGGCAAG ATCGTGCTGG TAATTGACGA AAGCCTGGTC
TGA
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| Protein sequence | MKALQGVEGH VEWVEEPSPA LDVGQVRIKV AAAGLNRADL LQRAGMYPPP PGVTATLGLE
CSGVIAEVGP GTSWLVGDRV CALLAGGAMA EEVVVDGRHV LPVPEGLTLH EAAAIPEVYA
TAWLNLFQLA GLKPGEKVLL HAGASGVGSA GIQLCKAFGN PVWVSVGSTE RLAYCVELGA
QGGVVRSESL EGLNDFAPFN VILDPVGANY AELNVKLLAL DGRWVLIGIM SGREAKVDLA
HVLGKRIQLM GSTLRSRDET FKADLISDLG QHVWPLFTEG RLKPQLAKSF AIKDAEAAFE
ELATNKVSGK IVLVIDESLV
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