| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3882 |
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| Symbol | |
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| ID | 1185553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4393656 |
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| End bp | 4394645 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395232 |
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| Product | polyamine ABC transporter, ATP-binding protein, putative |
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| Protein accession | NP_793653 |
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| Protein GI | 28871034 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTTTG TCAGCATTGA AAACCTGCAG AAAAGCTACG CCAGCACGTC AGTGTTCAGC
GACATCAACT GCCGCATCGC TAAAGGCGAA TTTGTCACCC TGCTTGGCCC GTCGGGCTGT
GGTAAATCCA CCTTGCTACG CTGCATTGCC GGGCTGACGC CGGTCAATAG CGGGCGCATT
CTGCTCGATG GCAATGACCT GGTGCCGCTC ACGCCGCAAA AACGCAATAT CGGCATGGTG
TTCCAGAGTT ACGCGCTGTT CCCCAACATG ACCGTGGAGC AGAACGTCGC GTTCGGCCTG
CGCATGCAGA AAGTCAGCGC AGACGACAGT GAACGGCGCG TCGCCGAGAT CTTGCGGATG
GTCGAGCTGC ATGATTTCGC CAAGCGCTAC CCGCATCAAC TGTCCGGCGG GCAATGCCAA
CGCGTGGCCC TGGCCCGCTC ACTGGTTACC CGCCCGCGCC TGCTGCTGCT CGATGAACCG
CTGTCGGCGC TGGACGCGCG GATCCGCAAG CTGCTGCGCG AACAGATACG TGCCATTCAG
CGCGAATTAG GCCTGACGAC CATTTTCGTG ACCCACGATC AGGAGGAAGC GCTGACCATG
TCTGACCGCA TCTTTCTGAT GAACCAGGGC CGGATCGTAC AGAGCGGCGA TGCAGAAACC
CTCTACACCG CGCCGGTCGA CGTGTTTGCC GCCGGTTTCA TCGGCAACTA CAACCTGCTG
GAAGCCGAAG ACGCCACGCG CCTGATGCAG CGCCCGATTG CCAGCCGCAT CGCGATCCGC
CCTGAATCGA TCCAATTGAG CCTGACCGGC GAACTGGAAG GCCAGGTTCG CAGTCACAGT
CTGCTCGGCA ACGTCATCCG CTACCGGATA CAGGCGCGTG GCGTGGACCT GGTGGTCGAC
GTACTCAACC GCAGCGCCGA AGACCTGCAC CCGGACGGCC GACGCGTTAC GCTGAACATC
GAGCCCTCGG CGCTGTGCGT TCTGAACTGA
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| Protein sequence | MSFVSIENLQ KSYASTSVFS DINCRIAKGE FVTLLGPSGC GKSTLLRCIA GLTPVNSGRI
LLDGNDLVPL TPQKRNIGMV FQSYALFPNM TVEQNVAFGL RMQKVSADDS ERRVAEILRM
VELHDFAKRY PHQLSGGQCQ RVALARSLVT RPRLLLLDEP LSALDARIRK LLREQIRAIQ
RELGLTTIFV THDQEEALTM SDRIFLMNQG RIVQSGDAET LYTAPVDVFA AGFIGNYNLL
EAEDATRLMQ RPIASRIAIR PESIQLSLTG ELEGQVRSHS LLGNVIRYRI QARGVDLVVD
VLNRSAEDLH PDGRRVTLNI EPSALCVLN
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