Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3876 |
Symbol | |
ID | 1185547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4387656 |
End bp | 4388945 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637395226 |
Product | aspartyl aminopeptidase |
Protein accession | NP_793647 |
Protein GI | 28871028 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1362] Aspartyl aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.761396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGACG AGTTGAACAA AGGCCTCATC GATTTCCTCA AGGCCTCACC TACCCCTTTT CATGCCACCG CCACCCTTGT GCAACACTTC GAAGCCGCGG GTTTTCAGCG TCTGGACGAA CGCGACACCT GGGCCATCGA GACCGGCGGC CGCTATTACG TTACCCGTAA CGATTCTTCC ATTGTCGCCA TCAGAATGGG TCGCCAGTCG CCATTGACCG GCGGCATCCG TATGGTCGGC GCGCACACCG ACAGCCCGTG CCTGCGGGTC AAGCCGCAGC CGGAATTGCA ACGCCAGGGC TTCTGGCAAC TGGGTGTCGA AGTCTACGGC GGTGCGCTGC TGGCACCGTG GTTCGACCGC GACCTGTCGC TGGCCGGGCG TGTCACGTTC CGTCGCGATG GCAAGGTTGA AAGCCAGCTG ATCGACTTCA AGCTGCCAAT TGCGGTCATT CCCAATCTGG CCATCCACCT GAACCGTACG GCCAACGAAG GCTGGACGAT CAATCCGCAG AACGAACTGC CGCCGATTCT TGCGCAGGTG GCCGGTGACG AGCGCGCAGA CTTCCGCGCT CTTCTGACTG ACCAACTGGC ACGCGAACAT GGCCTGAACG CCGATGTGGT GCTCGATTAC GAGTTGAGCT TCTACGACAC TCAGAGCGCA GCGGTGGTCG GCCTCAACGG TGATTTCCTG GCGGGCGCTC GTCTGGACAA TCTGCTGTCG TGCTTCGCCG GGATGCAGGC ACTGCTCAAC ACCGAGAGCG ACGAAACCGC CCTGCTGGTG TGCACCGATC ACGAAGAGGT CGGCTCGTCT TCCGCTTGTG GCGCAGACGG TGCGATGCTC GAGCAGATCG TTCAGCGCCT GTTGCCAAGC AGCGAAGATT ACGTGCGCAC GATTCAGAAG TCGCTGCTGA TCTCGGCCGA TAACGCCCAC GGCATTCATC CCAACTACGC TGACAAGCAC GACGCCAATC ATGGTCCCAA GCTCAACGCC GGGCCGGTGA TCAAGGTCAA CAGCAACCAG CGTTACGCCA CCAACAGCGA AACCGCCGGT TTCTTCCGCC ATCTGTGTAT GGCCGAAGAA GTCCCGGTGC AGAGCTTTGT GGTGCGCAGT GACATGGGTT GCGGCTCGAC CATCGGACCG ATCACTGCCA GTCATCTGGG TATTCGCACG GTAGACATCG GCTTGCCGAC GTTCGCCATG CACTCGATTC GCGAACTGGC CGGCAGCCAT GATCTGGCGC ATCTGGTCAA AGTGCTGGGC GCGTTCTATG CCAGTCACGA GCTGCCATAA
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Protein sequence | MRDELNKGLI DFLKASPTPF HATATLVQHF EAAGFQRLDE RDTWAIETGG RYYVTRNDSS IVAIRMGRQS PLTGGIRMVG AHTDSPCLRV KPQPELQRQG FWQLGVEVYG GALLAPWFDR DLSLAGRVTF RRDGKVESQL IDFKLPIAVI PNLAIHLNRT ANEGWTINPQ NELPPILAQV AGDERADFRA LLTDQLAREH GLNADVVLDY ELSFYDTQSA AVVGLNGDFL AGARLDNLLS CFAGMQALLN TESDETALLV CTDHEEVGSS SACGADGAML EQIVQRLLPS SEDYVRTIQK SLLISADNAH GIHPNYADKH DANHGPKLNA GPVIKVNSNQ RYATNSETAG FFRHLCMAEE VPVQSFVVRS DMGCGSTIGP ITASHLGIRT VDIGLPTFAM HSIRELAGSH DLAHLVKVLG AFYASHELP
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