Gene PSPTO_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3876 
Symbol 
ID1185547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4387656 
End bp4388945 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content61% 
IMG OID637395226 
Productaspartyl aminopeptidase 
Protein accessionNP_793647 
Protein GI28871028 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1362] Aspartyl aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.761396 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGACG AGTTGAACAA AGGCCTCATC GATTTCCTCA AGGCCTCACC TACCCCTTTT 
CATGCCACCG CCACCCTTGT GCAACACTTC GAAGCCGCGG GTTTTCAGCG TCTGGACGAA
CGCGACACCT GGGCCATCGA GACCGGCGGC CGCTATTACG TTACCCGTAA CGATTCTTCC
ATTGTCGCCA TCAGAATGGG TCGCCAGTCG CCATTGACCG GCGGCATCCG TATGGTCGGC
GCGCACACCG ACAGCCCGTG CCTGCGGGTC AAGCCGCAGC CGGAATTGCA ACGCCAGGGC
TTCTGGCAAC TGGGTGTCGA AGTCTACGGC GGTGCGCTGC TGGCACCGTG GTTCGACCGC
GACCTGTCGC TGGCCGGGCG TGTCACGTTC CGTCGCGATG GCAAGGTTGA AAGCCAGCTG
ATCGACTTCA AGCTGCCAAT TGCGGTCATT CCCAATCTGG CCATCCACCT GAACCGTACG
GCCAACGAAG GCTGGACGAT CAATCCGCAG AACGAACTGC CGCCGATTCT TGCGCAGGTG
GCCGGTGACG AGCGCGCAGA CTTCCGCGCT CTTCTGACTG ACCAACTGGC ACGCGAACAT
GGCCTGAACG CCGATGTGGT GCTCGATTAC GAGTTGAGCT TCTACGACAC TCAGAGCGCA
GCGGTGGTCG GCCTCAACGG TGATTTCCTG GCGGGCGCTC GTCTGGACAA TCTGCTGTCG
TGCTTCGCCG GGATGCAGGC ACTGCTCAAC ACCGAGAGCG ACGAAACCGC CCTGCTGGTG
TGCACCGATC ACGAAGAGGT CGGCTCGTCT TCCGCTTGTG GCGCAGACGG TGCGATGCTC
GAGCAGATCG TTCAGCGCCT GTTGCCAAGC AGCGAAGATT ACGTGCGCAC GATTCAGAAG
TCGCTGCTGA TCTCGGCCGA TAACGCCCAC GGCATTCATC CCAACTACGC TGACAAGCAC
GACGCCAATC ATGGTCCCAA GCTCAACGCC GGGCCGGTGA TCAAGGTCAA CAGCAACCAG
CGTTACGCCA CCAACAGCGA AACCGCCGGT TTCTTCCGCC ATCTGTGTAT GGCCGAAGAA
GTCCCGGTGC AGAGCTTTGT GGTGCGCAGT GACATGGGTT GCGGCTCGAC CATCGGACCG
ATCACTGCCA GTCATCTGGG TATTCGCACG GTAGACATCG GCTTGCCGAC GTTCGCCATG
CACTCGATTC GCGAACTGGC CGGCAGCCAT GATCTGGCGC ATCTGGTCAA AGTGCTGGGC
GCGTTCTATG CCAGTCACGA GCTGCCATAA
 
Protein sequence
MRDELNKGLI DFLKASPTPF HATATLVQHF EAAGFQRLDE RDTWAIETGG RYYVTRNDSS 
IVAIRMGRQS PLTGGIRMVG AHTDSPCLRV KPQPELQRQG FWQLGVEVYG GALLAPWFDR
DLSLAGRVTF RRDGKVESQL IDFKLPIAVI PNLAIHLNRT ANEGWTINPQ NELPPILAQV
AGDERADFRA LLTDQLAREH GLNADVVLDY ELSFYDTQSA AVVGLNGDFL AGARLDNLLS
CFAGMQALLN TESDETALLV CTDHEEVGSS SACGADGAML EQIVQRLLPS SEDYVRTIQK
SLLISADNAH GIHPNYADKH DANHGPKLNA GPVIKVNSNQ RYATNSETAG FFRHLCMAEE
VPVQSFVVRS DMGCGSTIGP ITASHLGIRT VDIGLPTFAM HSIRELAGSH DLAHLVKVLG
AFYASHELP