Gene PSPTO_3875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3875 
SymbolrluA 
ID1185546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4386649 
End bp4387284 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content60% 
IMG OID 
Productribosomal large subunit pseudouridine synthase A 
Protein accessionYP_001621407 
Protein GI162533083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0462638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTTGT CGAACATCCG CATCATTCAT CAGGACGCTG CCGTTCTGGT GATCGATAAG 
CCTACCCTGC TGCTTTCCGT CCCCGGCCGC GCCGATGACA ACAAGGATTG CCTGATTACC 
CGCCTGCAGG AAAACGGCTA CCCCGAAGCC CGAATTGTCC ATCGTCTGGA CTGGGAAACG 
TCCGGCATCA TCCTGCTGGC CCGTGATGCT GACACGCATC GCGAACTGTC GCGTCAGTTT 
CACGATCGCG AAACCGAGAA AGCCTATACA GCGCTGTGCT GGGGCCAGCC GTCGCTGGAC 
AGCGGCAGCA TAGACTTGCC GTTGCGTTAC GACCCACCGA CCAAGCCGCG ACATGTGGTG 
GATCACGAAG CAGGCAAGCA CGCGTTGACG TTCTGGAAGG TTGTAGAGCG GCATGACAGT 
CATTGCCGGG TGGAACTCAC GCCGATTACC GGCCGCTCGC ATCAATTGCG TGTGCACATG 
TTGTCGATCG GGCATCCGCT GCTGGGCGAT GGCCTGTATG CACATCCCGA GGCGCTGGCC 
GCGTATCCAC GCCTGTGCCT GCATGCCAGC ATGCTGAGCT TTACGCATCC TGGGACTGGC 
GAACGCTTGA CGTTTGAATG CCCCGCGCCG TTTTGA
 
Protein sequence
MPLSNIRIIH QDAAVLVIDK PTLLLSVPGR ADDNKDCLIT RLQENGYPEA RIVHRLDWET 
SGIILLARDA DTHRELSRQF HDRETEKAYT ALCWGQPSLD SGSIDLPLRY DPPTKPRHVV 
DHEAGKHALT FWKVVERHDS HCRVELTPIT GRSHQLRVHM LSIGHPLLGD GLYAHPEALA 
AYPRLCLHAS MLSFTHPGTG ERLTFECPAP F