Gene PSPTO_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3873 
SymbolminD 
ID1185544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4385492 
End bp4386304 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content59% 
IMG OID637395224 
Productseptum site-determining protein MinD 
Protein accessionNP_793645 
Protein GI28871026 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.748671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCAAGA TTCTCGTAGT TACATCCGGC AAGGGTGGTG TGGGCAAGAC CACCACCAGC 
GCCGCTATCG GTACAGGCCT CGCATTGCGC GGCCACAAGA CAGTCATCGT CGACTTCGAC
GTCGGCCTGC GTAACCTCGA CCTGATCATG GGTTGCGAGC GTCGTGTCGT GTATGACTTC
GTCAACGTGG TCAATGGCGA AGCCAACCTG CAACAGGCGT TGATCAAGGA CAAGAAGATC
GAAGGCCTGT TCGTACTGGC CGCCAGCCAG ACCCGGGACA AGGATGCACT GACCAAGGAG
GGCGTTGAAA AAGTCCTCAT GGAGCTGAAG GAATCGTTCG AATACATCGT CTGCGACTCG
CCGGCGGGTA TCGAAACCGG TGCTCATCTG GCGATGTACT TCGCTGATGA AGCCATCGTC
GTGACCAACC CGGAAGTCTC GTCGGTACGT GACTCCGATC GCATGCTGGG CCTGCTGGCC
AGCAAGTCGC GTCGCGCCGA GCGTGGCGAA GACCCGATCA AGGAACACCT GCTGCTGACC
CGTTACAACC CTGAGCGAGT CAGCAAAGGC GAGATGCTCG GCGTTGAAGA CGTCAAGGAA
ATCCTTGCCG TTACCCTGCT CGGCGTGATC CCGGAGTCGC AGGCTGTCCT CAAGGCCTCC
AACCAGGGCG TTCCGGTTAT TCTGGACGAC CAGAGCGACG CCGGTCAGGC CTACAGCGAT
GCCGTTGACC GCCTGCTGGG CAAGGACCGG GAGCATCGCT TCCTGGATGT ACAGAAAAAA
GGATTCTTTG AACGTCTGTT CGGGGGTAAC TGA
 
Protein sequence
MAKILVVTSG KGGVGKTTTS AAIGTGLALR GHKTVIVDFD VGLRNLDLIM GCERRVVYDF 
VNVVNGEANL QQALIKDKKI EGLFVLAASQ TRDKDALTKE GVEKVLMELK ESFEYIVCDS
PAGIETGAHL AMYFADEAIV VTNPEVSSVR DSDRMLGLLA SKSRRAERGE DPIKEHLLLT
RYNPERVSKG EMLGVEDVKE ILAVTLLGVI PESQAVLKAS NQGVPVILDD QSDAGQAYSD
AVDRLLGKDR EHRFLDVQKK GFFERLFGGN