| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3860 |
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| Symbol | aceE-1 |
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| ID | 1185531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4372314 |
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| End bp | 4374983 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395211 |
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| Product | pyruvate dehydrogenase, E1 component |
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| Protein accession | NP_793632 |
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| Protein GI | 28871013 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
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| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGC AACCCCGGTT TCTTGACGAG GATCCGCAAG AAACCCGCGA ATGGCTCGAA
TCGATCGAGT CGGTACTCAA CAGTGAAGGG CGTCCGCGCG CGCACTACCT GATCGATCAG
TTGCTGGACT TCGATGTCGC CCAACACGGC GATTTCTATG GTCGGGTCAC GACGCCCTAC
GTCAATACCA TTCCCCTCGA CCGCCAGCAG CCTTATCCGG GCGATCTGCA GGTTGAAAAG
CGCATCAATG CCTTCATCCG CTGGAACGCG CTGGCCATGG TGCTGCGTGC CGGCAAGCAT
TCCGGTGTCG GTGGCCACAT TGCTTCCTAT GCGTCTGCGG CAGTGCTTTA CGATGTTGGT
TTCGATCACT TCTTTCGCGG GCGTACCGAG CAGTTCGCCG GTGATCTGGT TTACATCCAA
GGCCATTCCT CGCCAGGCAT CTACGGCAGG GCTTATCTGG AAGGTCGCCT GAGCGAAGAG
CAACTGGATA ACTTCCGTCG CGAAACCGAC CGCGACGGTA TTTCGTCCTA TCCGCATCCG
CGTCTGATGC CGGACTTCTG GCAATTTCCC ACGGTTTCGA TGGGCCTGGG GCCGATTACG
GCGGCGTATC ATGCGCGCTT CATGCGCTAT CTGGAAAACC GCGGGCTCAA GGAGCATCAG
GGCCGCAAGG TCTGGGCATT CCTTGGCGAT GGCGAAATGG ACCAGCCCGA GTCTCAGGCA
GCCGTTGCAC TGGCCGGACG CGAAAAGCTC GACAACATCA TCTTCGTCGT CAACTGCAAC
CTGCAACGTC TCGACGGGCC GGTGCGCGGT AACAGCAAGG TCATTCAGGA GTTCGAAAGC
CTCTACCGCG CCGCTGGCTG GAACGTCATC AAGGTCATCT GGGGCGGCGG CTGGGATGCG
CTGCTGGAGA AAGACAAGAG CGGTTTGTTG CGTCAGCGCA TGATGGAATG CGTGGACGGT
GAGTACCAGA ACTACAAATC CCAGAATGGC GCTTACGTGC GCGAGCATTT CTTCGGCAAA
TACCCGGAGT TGCTGGAACT GGTCAGCGAC CTGAGCGATG ACGACATCTG GAAGCTCTCG
CGCGGCGGTC ACGACCCGGA AAAAGTCTAC AACGCTTACG CAGCCGCCAT GCGCCACCAG
GGCGGACCGA CCGTGATCCT GGCCAAGACA GTCAAAGGCT TCGGCATGGG TGAGGCGGGT
GAAGGGCAGA ACATCAACCA TCAGTTGAAG AAACTGGGCG CTGATGCGAT CAAGGCTTTC
CGTGACCGTT TCGCGCTGGA CATCACAGAC GATCAATTGG GCGACATGCC TTACCTCAAG
CCTGCCGAGG GCAGTACCGA GGCGCTATAC CTCAAGGCCC GTCGCGCGCA ACTGGGCGGG
TACATTCCGG CGCGTTTCAG TGATGCCGCC ACCTTGCAGG TCCCGCCGCT CTCGGCGCTG
GATACCCAGC TCAAGAACAC CGGCGATCGC GGTATATCGA CGACCATGGC CTTTGTGCGC
ATCCTGTCGA CGCTGCTCAA GGACCCGAAC ATCGGCAAAC TGATCGTGCC CATCGTGCCG
GACGAGTCCC GCACCTTTGG CATGGAGAAC CTGTTCCGCC AGATCGGTAT TCATTCCCAC
GTCGGTCAGT TGTACACGCC ACAGGACGCG GGGCAACTGA GCTACTACAA GGAAAGCACA
GACGGGCAGA TCATGCAGGA AGGGCTCAAC GAGTCCGGTG CCATTTCCTC ATGGATCGCG
GCCAGTACGT CCTATGCCAA CCACGGCGTG ATGACCGTGC CGTTCTATAT TTTCTATTCG
ATGTTCGGCT TCCAGCGCGT GGGTGATCTT GCCTGGGCGG CGGGTGATGC CCGGGCGCGG
GGGTTTCTGC TGGGGGCCAC GTCAGGCCGG ACCACACTGA TGGGCGAGGG CCTGCAACAT
GACGACGGCC ACAGCCATGT GATGTCATCG ACGATACCCT GCTGCGTGTC GTACGACCCG
ACGTTTGCGT TTGAGCTCGC GGTGATCATT CAGGACGGCA TGCGCCGCAT GTTTGCCGAA
AACGAAGACA TTTATTACTA CATCACGTTG CCCAACGAAA ACTACCCGCA CCCTGATCTG
CCCGAAGGTG CCGAGCCCGG CATTCTCAAA GGCATGTACC CTTTGCAGGC CAGTGCATCG
ATCAACACCG GCAAGCACGT GCAACTGATG GGCTGCGGGT CGATCCTGCT GGAGGTCATC
GCCGCCGCCC GCTTGCTGGA GGATGATTTT GGCGTGAGCA GCGAAATCTG GAGCGTCACC
AGCCTTACCG AGCTGCGTCG TGAAGGCCAG GATGTGGAGC GCTGGAACCT GCTTAATCCC
GAGCAGGAGC CGCGTCTGAG CTACGTGGAA AGCTGCCTGG CAGACAGGGA AGGGCCGGTT
GTCGTGGCGA CGGATTACAT GAAGATATTC GCCGATCAGA TTCGCCCGTT CGTGCCCCTG
CGCCGCTTTG TGGCACTGGG TACCGATGGC TTTGGCCAGT CTGATACGCG TGAGTCGCTG
CGTCACTTCT TCGAGGTAGA CCGTTACTTC GTCGCGGTGG CGGCGCTAAA GGCGCTGGCC
GATGACGGCA AGGTTGAACG CAAGGTCGTG GCGCAAGCCA TCGAACGCTA CAAAATCAAC
CCTGACAAGC AGAACCCGGT GCTGGTCTGA
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| Protein sequence | MAQQPRFLDE DPQETREWLE SIESVLNSEG RPRAHYLIDQ LLDFDVAQHG DFYGRVTTPY
VNTIPLDRQQ PYPGDLQVEK RINAFIRWNA LAMVLRAGKH SGVGGHIASY ASAAVLYDVG
FDHFFRGRTE QFAGDLVYIQ GHSSPGIYGR AYLEGRLSEE QLDNFRRETD RDGISSYPHP
RLMPDFWQFP TVSMGLGPIT AAYHARFMRY LENRGLKEHQ GRKVWAFLGD GEMDQPESQA
AVALAGREKL DNIIFVVNCN LQRLDGPVRG NSKVIQEFES LYRAAGWNVI KVIWGGGWDA
LLEKDKSGLL RQRMMECVDG EYQNYKSQNG AYVREHFFGK YPELLELVSD LSDDDIWKLS
RGGHDPEKVY NAYAAAMRHQ GGPTVILAKT VKGFGMGEAG EGQNINHQLK KLGADAIKAF
RDRFALDITD DQLGDMPYLK PAEGSTEALY LKARRAQLGG YIPARFSDAA TLQVPPLSAL
DTQLKNTGDR GISTTMAFVR ILSTLLKDPN IGKLIVPIVP DESRTFGMEN LFRQIGIHSH
VGQLYTPQDA GQLSYYKEST DGQIMQEGLN ESGAISSWIA ASTSYANHGV MTVPFYIFYS
MFGFQRVGDL AWAAGDARAR GFLLGATSGR TTLMGEGLQH DDGHSHVMSS TIPCCVSYDP
TFAFELAVII QDGMRRMFAE NEDIYYYITL PNENYPHPDL PEGAEPGILK GMYPLQASAS
INTGKHVQLM GCGSILLEVI AAARLLEDDF GVSSEIWSVT SLTELRREGQ DVERWNLLNP
EQEPRLSYVE SCLADREGPV VVATDYMKIF ADQIRPFVPL RRFVALGTDG FGQSDTRESL
RHFFEVDRYF VAVAALKALA DDGKVERKVV AQAIERYKIN PDKQNPVLV
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