| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3857 |
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| Symbol | |
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| ID | 1185528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4368229 |
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| End bp | 4370676 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395208 |
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| Product | acyl-CoA dehydrogenase family protein |
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| Protein accession | NP_793629 |
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| Protein GI | 28871010 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.870588 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGTTGT TGTGGATTGT AGTGCTGGTC GTCGGCATTG CCTGGCTGGC TCATCGACGT
ACCGCCCCGC TTCCGGCGCT AGGCGTGGTT GCCGTCTATC TGCTGGCCAT GGGCATTTTC
AGTCACGCGC CAGGATGGCT GCTGACTGTG TTCTGGGTGC TGTGGCTGGC AGTGTTCGTG
CCCCTGGTGC TGCCAGACCT GCGCCGCAAG CATTTCACGG CGCCCATGTT CAGCTGGTTT
CAGAAAGTGT TGCCGCCCAT GTCGGAAACC GAGCGCGATG CCATTGATGC CGGTACGGTC
TGGTGGGACG GCGAGCTGTT CAGCGGTCGT CCGGACTGGG ACAAGCTCCT GGCCTACCCG
AAAGTCCAAC TGACGGAGGA AGAACAGGCC TTTATCGACG GCCCGACCGA AGAACTCTGC
GCGATGGTCA GCGACTGGGA GATCGGTCAG GCGATGGACC TGCCGCCCGA AGCTTGGGCG
CACATGAAAA CGCACGGTTT CTTTGCGCTG ATCATTCCAA AGGAGTTCGG CGGCAAGGGC
TTTTCGGCCT ACGCGCACTC CCAGGTGGCC ATGAAACTGG CCACCCGCAG CGGCGACCTG
GCGTCCACCG TGATGGTGCC CAACTCCCTC GGCCCGGCTG AGCTGCTGCT GCATTACGGC
ACCGATGAAC AACGCAACCA TTACCTGCCG CGTCTGGCGC GTGGCGAAGA CATCCCTTGT
TTCGCGCTGA CCGGCCCGCT GGCAGGGTCC GATGCCGGCG CGATGCCCGA CACCGGAATC
ATCTGCAAAG GCCAGTGGCA AGGTGAGGAA GTCATCGGTT TGCGCCTGAC CTGGGAAAAG
CGCTACATCA CCCTTGGCCC GGTAGCCACC CTGCTGGGGC TGGCATTCAA GGCGTACGAC
CCGGAACACC TGCTGGGAGA GGAAGAGGAC CTGGGCATCA GCCTGGCACT GATCCCCACC
GAAACACCCG GTGTGGAGAT CGGCCGCCGT CACCTGCCGC TGGGCGCGGC GTTCATGAAC
GGCCCCAACT CGGGCAAAGA CGTGTTCGTG CCCCTGAGCT ATCTGATCGG CGGCCAGCCG
ATGCTCGGCA AGGGCTGGAT GATGCTGATG AACTGCCTCT CGGTAGGCCG TTCGATCTCG
CTGCCGGCAG TCGGCACCGG CGCTGCCAAG TACACCAGCC TGGTGACTGG CCAGTACGCG
AAGGTGCGCG AGCAGTTCAA TGTGCCACTG TCGGCCTTCG AAGGCATTCA GGAAGCACTG
GCGCGTATAG GCGGCAATGC CTGGCTGATG GACAGCGCAC GCATGCTGAC CGCCAATGCG
GTCGATCTGG GCGAGAAGCC GTCGGTTCTG TCGGCCATCC TCAAGTACCA CCTGACCGAA
CGTGGCCGCG AATGCATTGG CCACGCGATG GACGTGCATG GCGGCAAGGG CATCATCATG
GGCCCGAACA ACTACCTGGG CCGCAACTGG CAAGGTGCAC CGATTTTCAT CACGGTTGAA
GGCGCCAATA TCCTTTCACG CAACCTGATG ATATTCGGCC AGGGCGCCAT TCGTTGCCAC
CCGTTCGTGC TCAAGGAAAT GGCCCTGGCC GGACGCGAAG ACAAGCAGCA AGCGCTGGTT
GAGTTCGACA CCCTGCTGCT CAAACACATC GGCTTTGCGG TAAGCAACGC CGCCAGCACC
TTGATTCTCA ACCTGGGCTT TGGCCATTTC GAACGAGCGC CGGGCAACGC CCTGAGCCAG
GGTTACTTCC GCGCACTGAA CCGTCAGGCC GCAGCGTTCG CCATGCTGGC GGACTTGAGC
ATGATGCTGC TGGGTGGCGA GCTGAAGCGC CGCGAACGCC TGTCGGCGCG GCTGGGTGAT
GTACTCAGCC ACATGTACCT GGCCTCGGCA GCGCTCAAGC GTTATCACGA TCTCGGCTCG
CCGGATCACA TGAGCCCGCT GTTTCGCTGG GCCATGGAAG AAAGCCTGGG GCACTCTGAA
CGCGCCATGG ACGAAATCCT CGGCAACTTC CCCAACCCCT TGCTGGGCGG GCTGTTGCGC
GCAGTGGTAT TTCCGTTCGG CCGTCGTCAC AAAGGCCCTT CGGACAAGCT GGATGCCGAA
GTCGCACAGG TGCTGGGGCG CGCCAAGGGT GACCCGACGC TGGAAGAGTT GCTGGCAGGC
TGCTATCGCC CGCAATCGGC AGAGGATCCG GTGGGTGCAC TGCAACATGC CATTGACCTG
CTGAGCGCTG CTTATCCGTT GCACAAGAAG CTACAAGTGG CGCTCAAGAG CGGCCAGGTC
AAACCGACCG CAGGCGAGCA CGCCATCGAC GCTGCATTGC GCATCGGTGT GTTGCAGGCA
GACGAGGCAC AGACACTGCG CACAGCCGAA GCGGCCCGTC GCAAAGTGAT CGATGTCGAT
GATTTCGACA AGGAAGAACT GACCCTGGCA GCGGGCAAAA TCCGCTAA
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| Protein sequence | MLLLWIVVLV VGIAWLAHRR TAPLPALGVV AVYLLAMGIF SHAPGWLLTV FWVLWLAVFV
PLVLPDLRRK HFTAPMFSWF QKVLPPMSET ERDAIDAGTV WWDGELFSGR PDWDKLLAYP
KVQLTEEEQA FIDGPTEELC AMVSDWEIGQ AMDLPPEAWA HMKTHGFFAL IIPKEFGGKG
FSAYAHSQVA MKLATRSGDL ASTVMVPNSL GPAELLLHYG TDEQRNHYLP RLARGEDIPC
FALTGPLAGS DAGAMPDTGI ICKGQWQGEE VIGLRLTWEK RYITLGPVAT LLGLAFKAYD
PEHLLGEEED LGISLALIPT ETPGVEIGRR HLPLGAAFMN GPNSGKDVFV PLSYLIGGQP
MLGKGWMMLM NCLSVGRSIS LPAVGTGAAK YTSLVTGQYA KVREQFNVPL SAFEGIQEAL
ARIGGNAWLM DSARMLTANA VDLGEKPSVL SAILKYHLTE RGRECIGHAM DVHGGKGIIM
GPNNYLGRNW QGAPIFITVE GANILSRNLM IFGQGAIRCH PFVLKEMALA GREDKQQALV
EFDTLLLKHI GFAVSNAAST LILNLGFGHF ERAPGNALSQ GYFRALNRQA AAFAMLADLS
MMLLGGELKR RERLSARLGD VLSHMYLASA ALKRYHDLGS PDHMSPLFRW AMEESLGHSE
RAMDEILGNF PNPLLGGLLR AVVFPFGRRH KGPSDKLDAE VAQVLGRAKG DPTLEELLAG
CYRPQSAEDP VGALQHAIDL LSAAYPLHKK LQVALKSGQV KPTAGEHAID AALRIGVLQA
DEAQTLRTAE AARRKVIDVD DFDKEELTLA AGKIR
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