Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3855 |
Symbol | |
ID | 1185526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4366330 |
End bp | 4367262 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395206 |
Product | ABC transporter, ATP-binding protein |
Protein accession | NP_793627 |
Protein GI | 28871008 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.324637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCTG CTCTGTCCAT TCGGCAGCTC ACCAAAACCT ACGGCAACGG TTTCCAGGCC CTGAGTGGCA TTGATCTGGA CGTTGCTGAA GGTGATTTCT TCGCTTTGCT CGGCCCTAAC GGCGCAGGCA AATCCACGAC CATCGGCATC ATCTCGACAC TGGTCAACAA GACCAGCGGC ATGGTGAACA TCTTCGGCCA CGACCTGGAC CGCGAACCCG CTGCGCTCAA GCGCTGCATC GGCGTGGTGC CGCAGGAATT CAATTTCAAC CAGTTCGAAA AGACCTTCGA CATCGTTGTG ACCCAGGCCG GTTACTACGG CATCCCGGCG AAAATCGCCA AAGAACGCGC CGAGCAATAC CTGACGCAAC TTGGCCTGTG GGACAAACGT GACGTGCCTT CGCGCTCGCT GTCCGGCGGC ATGAAACGAC GCCTGATGAT CGCCCGCGCG CTGATTCACG AACCGCGCCT GCTGATTCTC GATGAGCCCA CCGCTGGCGT GGATATCGAG CTGCGCCGTT CGATGTGGAC GTTTCTCACC GAACTGAACA AAAAAGGCAT CACCATCATC CTCACCACGC ACTATCTGGA AGAGGCTGAA CAGCTGTGCC GTAACATCGG CATCATTGAC CACGGGGTGA TCGTGCAGAA CACCGGCATG AAGCAATTGC TCAGCACCTT GACCGTCGAA ACCTTCGTGC TGGACCTCAA AGCCTCGTGG CAAACCGCGC CGCAACTGCC TGGCTTCCCC AGCCGCTTGC TGGACAGCCA CACCCTGGAA GTTCAGGTCG ACAAGAACGT CGGTATCACC GCGCTGTTCA GCCAATTGGC CTTTCAGGAC ATCGAAGTGT TGAGCCTGCG CAATAAATCC AATCGCCTTG AGGAATTGTT CGTGTCCCTG GTGGAAAAAA ACCTTGCGAA GGTGGCGCTA TGA
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Protein sequence | MSSALSIRQL TKTYGNGFQA LSGIDLDVAE GDFFALLGPN GAGKSTTIGI ISTLVNKTSG MVNIFGHDLD REPAALKRCI GVVPQEFNFN QFEKTFDIVV TQAGYYGIPA KIAKERAEQY LTQLGLWDKR DVPSRSLSGG MKRRLMIARA LIHEPRLLIL DEPTAGVDIE LRRSMWTFLT ELNKKGITII LTTHYLEEAE QLCRNIGIID HGVIVQNTGM KQLLSTLTVE TFVLDLKASW QTAPQLPGFP SRLLDSHTLE VQVDKNVGIT ALFSQLAFQD IEVLSLRNKS NRLEELFVSL VEKNLAKVAL
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