Gene PSPTO_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3855 
Symbol 
ID1185526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4366330 
End bp4367262 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content57% 
IMG OID637395206 
ProductABC transporter, ATP-binding protein 
Protein accessionNP_793627 
Protein GI28871008 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.324637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTG CTCTGTCCAT TCGGCAGCTC ACCAAAACCT ACGGCAACGG TTTCCAGGCC 
CTGAGTGGCA TTGATCTGGA CGTTGCTGAA GGTGATTTCT TCGCTTTGCT CGGCCCTAAC
GGCGCAGGCA AATCCACGAC CATCGGCATC ATCTCGACAC TGGTCAACAA GACCAGCGGC
ATGGTGAACA TCTTCGGCCA CGACCTGGAC CGCGAACCCG CTGCGCTCAA GCGCTGCATC
GGCGTGGTGC CGCAGGAATT CAATTTCAAC CAGTTCGAAA AGACCTTCGA CATCGTTGTG
ACCCAGGCCG GTTACTACGG CATCCCGGCG AAAATCGCCA AAGAACGCGC CGAGCAATAC
CTGACGCAAC TTGGCCTGTG GGACAAACGT GACGTGCCTT CGCGCTCGCT GTCCGGCGGC
ATGAAACGAC GCCTGATGAT CGCCCGCGCG CTGATTCACG AACCGCGCCT GCTGATTCTC
GATGAGCCCA CCGCTGGCGT GGATATCGAG CTGCGCCGTT CGATGTGGAC GTTTCTCACC
GAACTGAACA AAAAAGGCAT CACCATCATC CTCACCACGC ACTATCTGGA AGAGGCTGAA
CAGCTGTGCC GTAACATCGG CATCATTGAC CACGGGGTGA TCGTGCAGAA CACCGGCATG
AAGCAATTGC TCAGCACCTT GACCGTCGAA ACCTTCGTGC TGGACCTCAA AGCCTCGTGG
CAAACCGCGC CGCAACTGCC TGGCTTCCCC AGCCGCTTGC TGGACAGCCA CACCCTGGAA
GTTCAGGTCG ACAAGAACGT CGGTATCACC GCGCTGTTCA GCCAATTGGC CTTTCAGGAC
ATCGAAGTGT TGAGCCTGCG CAATAAATCC AATCGCCTTG AGGAATTGTT CGTGTCCCTG
GTGGAAAAAA ACCTTGCGAA GGTGGCGCTA TGA
 
Protein sequence
MSSALSIRQL TKTYGNGFQA LSGIDLDVAE GDFFALLGPN GAGKSTTIGI ISTLVNKTSG 
MVNIFGHDLD REPAALKRCI GVVPQEFNFN QFEKTFDIVV TQAGYYGIPA KIAKERAEQY
LTQLGLWDKR DVPSRSLSGG MKRRLMIARA LIHEPRLLIL DEPTAGVDIE LRRSMWTFLT
ELNKKGITII LTTHYLEEAE QLCRNIGIID HGVIVQNTGM KQLLSTLTVE TFVLDLKASW
QTAPQLPGFP SRLLDSHTLE VQVDKNVGIT ALFSQLAFQD IEVLSLRNKS NRLEELFVSL
VEKNLAKVAL