| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3854 |
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| Symbol | |
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| ID | 1185525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4365545 |
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| End bp | 4366333 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395205 |
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| Product | ABC transporter, permease protein |
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| Protein accession | NP_793626 |
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| Protein GI | 28871007 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.605289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGTGC AGAGCGGCGA GTTGCGCCCC AACCTGATTG CCCTGAAGAC CATCGTGTAT
CGCGAAGTCC ATCGTTTCAT GCGGATCTGG CCGCAGACCC TGCTGCCGCC TGCGATTACC
ATGGTTCTGT ACTTCGTGAT CTTCGGTAAC CTGATCGGCC GTCAGATCGG CGACATGGGT
AGCTTTACCT ACATGCAGTA CATCGTGCCG GGGCTGATCA TGATGTCGGT GATCACCAAC
TCCTATGGCA ACGTGGTCTC GAGCTTCTTC GGCGCCAAGT TTCAGCACTC CATCGAAGAA
CTGATGGTGT CGCCGGTCTC GCCGCACACC ATCCTGATCG GCTACACGCT GGGCGGCGTG
TTGCGCGGTC TGATGGTGGG CTTCATCGTC ACTATGCTGT CGATGTTCTT CACCGACCTG
CAAGTGCACC ACCTGGGCGT GACCATCGTC GTGGTCGTGC TGACGGCGAC GATCTTCTCG
TTGCTGGGTT TCATCAACGC AGTGTTTGCG CGTAACTTCG ACGATATCTC GATTATCCCG
ACGTTCGTGC TGACCCCGTT GACCTACCTG GGCGGCGTGT TCTACTCGAT CAACCTGCTG
CCGCCGTTCT GGCAGACCGT GTCACTGGCC AACCCGGTCC TGCACATGGT CAACGCCTTC
CGCTACGGCA TTCTGGGTGT CTCCGACATC AAGATCAGCA TCGCCCTGGC GTTCATGATC
GTCGCGACCT TCGTCCTGTA CTTCGGCTGC GCACGGCTGC TGGTGAGCGG GCGTGGTATG
CGTCAGTAA
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| Protein sequence | MTVQSGELRP NLIALKTIVY REVHRFMRIW PQTLLPPAIT MVLYFVIFGN LIGRQIGDMG
SFTYMQYIVP GLIMMSVITN SYGNVVSSFF GAKFQHSIEE LMVSPVSPHT ILIGYTLGGV
LRGLMVGFIV TMLSMFFTDL QVHHLGVTIV VVVLTATIFS LLGFINAVFA RNFDDISIIP
TFVLTPLTYL GGVFYSINLL PPFWQTVSLA NPVLHMVNAF RYGILGVSDI KISIALAFMI
VATFVLYFGC ARLLVSGRGM RQ
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