Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3851 |
Symbol | |
ID | 1185522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4360417 |
End bp | 4363731 |
Gene Length | 3315 bp |
Protein Length | 1104 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395202 |
Product | hypothetical protein |
Protein accession | NP_793623 |
Protein GI | 28871004 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.137457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAACC GGGAAAGCCA CACAGCGATC ATCCGTCTGG CTGACGCCGA CCGCGCAGCC AGCACAAGAC CTCACGACGA TATCAACAGC CCGGTGGCAA GCTGTCCTGC CAGCCAGGCA AAGGTGTTTG TGGTGCCTGT GCGTTATGCA CTTGCGGAGC AAGCAGCCAC TCATTCCGCT TTTCAGCCCG GCGTAACGCC GCAAAGCCAC GCGATGGCTG CTCGGCAACT GCGAAGCGGT TTTCTCTATG TATGGCAACG GCATGGACCG CTGCAACGCT TTGCCGTATC AGCACAGGGC ATGCTGGAGC CTCAGGCACT GGCTGACAAT GCTACGGCGA TTGAAAGCGG CTCGCTGTCG GGTCTGGCCC TCGACAAGCT TCATGAAACC TGGCTGCTCT ATACCGAGCA GCCGCTTGAC GTAAAGCACT GCGCGCGCCT GAGCGAGCGG GAGGTCCGCC AACAACACAT GCGCTCCATC GACCTGCGCG AGGTGGCCGA CGCTCTTCAT GCCCCGCACT GCCCACCGCT TTCAGCAGCC GAGCAGGTTA TTGCCGAACT GATACCGGAC ACCTTTGCCT GGGCGGTAAC AATCGATCAA CGGCGCAACG GCGAGCTCAA CAGAGAAAAA ACCGAGAAAC TGGCCGAGGT CATGAGACGC GACCCGTCCT CCGCCAACAT CAACGCCTAC GTCAAGATGA CACGCGATAA TAAAGAGCGT GAGAGCATGA CCAGGCACTA TCCCGACGCC CGGGAAGATG ACGTGGCGCC TGGTGCCTGG AGCACCCAGC CCTGGGAAGC CCTGCGCACG CAGGCCTGGC TGGAAAATAC CCGCAAACAG GCGCAGGGCT TATGGTCGGT ATTCGCGTGC CTGGACGATG ATCTGGGCGT ACTGCGCGAT ATCAATCATG AGCAGGAGCA AGTGGAAATC GCTCACGCCA GATGGCAGGA GGATCACAAC CTGCATCTGG GCATTGGCGG CTTCATTCGC ACCCTGGTCA CCGAGGAGCC CGGCGAGGTA GCAAGCCTGC TGAAGTATCG CTACCGCGAG CGGGATATTC AGATCACGAC AGCGCAGGGT CAACTGTTGC TGGACGCCAG CCAGCGTGTA GACGAACTCA ATAAAGAGGC GGTCCGGGTC AGTCGCGGCA GAGGACGTCA GTACAGCCGC GAGCAGGCCG ACAGGCTTAT CGAAGCGCTG CGGATCAAAC GCCAGGAAGC CGTGGAGCCG GTCAAAGCGT TCATTCCCGC CGACCTGAGT GACGAGGTGG AAAGCGTGGT GCGCGAGTAC CGGAAGGAAA AGGTCAGCAA CCTGGAAAAC CATCACGTCA GTGCCAAGGT CGGCGAGTAC ATCGACCTGC CGTTGATGAA CGCCTGGCTG GACCAGACCG CGCCAGACCA CTACCAGCGC GTGGAAGCCC GCCACACGAC ACTTTATGCG GATCGCAGTC AGTTTCTGAA ACGGCATCAG AGCGGTACAT GGTTCGTGGA TTACACCAAC CCCGCGCACC GTTTGTGGCT GGATGAACTG GCCATGGCCT GCCTGAGCGC GCAATGTGTG CGCAGCCTGG GTGCCGAGCA ATACGCCGAG TATGTGCGCA GCGCAAATTC CGGCGCACTA CGCCAACTGT TCTTTGCCTG GAGCCCGACG CTTGAAGGCG CGCTCAATAG CGAAACGCGA CTGGGCGAGC TACTCGCCGC GCTGAGCCTG GAGAACCAGG ACAACGCACG TCAGGCCATG GCCAAAGTAC TGGAGCATCT GGCCGAACCG ATTCTCTCCG ACATGAGCAA CATGGCTCGC GATGCCACAG GTGTCTGGAG CACGCTGGTC AAACGTCTTG GCGCTGCCTT GTTGCTGCTC AAAAGTGAAC ATACCGACCG CCTCAGCGGG GCCTGGACCA CCATCCTCAT GGCCGCCCGG CTGGGCAATG AAGTAGGCAC CCGAGTCATA AACGAAGGCG GGACCCGCCT GCTCCAGGCC TTCGGCCCCG GCATCAATGA CTTCGTGCAC TGGGTAAAAA GCACCGCCCA CGCAATCTCC ATCGGCCAGG TCGCAAGAAT CGTCAACTCA CCCGCCGTAC AAAACAGCGG CGGCCTGGCC CCAATGGTCG TGCTGCTGCT CAATACCCTG AATACCCACA ACTACCTGAA TCAGGCCGGT GCGCTTGAAA AGATGGACGA GCAGAGGATC AACGATACGG CTTCTGCGGC GCTGTATTGG GGGGCGGCAT TGGTTGCGGT GCTGGACAGT CAGGTGCGCA AGGGGATGGG GATAGAAGTT CTGGGCAGGG GCAGTGCGAT GACACCGACG ATTACTCTGT TTGGGGGGAT TATTGGGGGG TTGTCGGCTG CTGCTGCGTT CAAAGAATTC AAATCTTTAA GTACACAACT TGAAAACTCA CAAAACTCTG TCGACCCCTG GCTGGAGATA CGCCAAAACG TGGTAGGCGG ACAAGTAGCG GCCTACGGTG CACAGGCGAT AGTCGGGATC GCCTACACCT CGCGCGCCCT TCTCGGCATC ATCTCTGTCG AAGCAGCCAC TGTAGGTTTT ATGCTTTGGA TGGGGCCTAT TATCTGGATC ATTGCTCTAC TGGGCGTTCT GTACCTGATC GCTTGGTATC TTCAGCAAAC CCCGTTACAA AACTTCTTGA GTAATTGCTG TTGGTCCAGG CAACGTGCGC ATGACCGGTC ACCCATCAGT CAGAAGCGCC AGATGGAAGA GCTGGATCGC CTCTATCTCA TTCTTTACGC ACCCCGCATC AGTTTCACGG CAGAGGAAGA AGCTCTCCCG GCGGACAACC GCGACGGAAT AACCTACCAA GGCTACATCA AGACCCTGAC CATCGATCTG CCCGGTGCGA CACCCAACAA CATCCGGCTG GACCTGTCGA TGATCGGCGA CCCGATGGAT TATCAGCTCT GGCTGGAAAT ACGTGGCGCG CCTGGCTTGA CCGAACGTCC TCACACCGTG CGCAACATGG GCGCTCACTG GCTGAGAAAC AGCACTTGCG AGTGGATTCC CGTAGCACAA GGCCAAGGGC TGCGTCTTAC CGGTGTTTTC AAGCGTATCG ATCGCGAACT CGGCTCATTG CCACGCAGCG TGTCGTTGCG CGTGCGCTAC GGGACACCAT TTACTGCGCT GTACGGTGTT CAAGGCTTCA TCGGCGGCGC GCGAGGTCTG GCCTTTACTG TAACGCCCGA AAATGGCGTT ATCGCCCTGC GCAATGATCC CACTCCGAAA CTGGACAGTG CTCAGGTCTA CAAACTGGGC GAACAGCAGT GCTCTGTATT CCTGCAACCC GGGATCAGAC GGTGA
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Protein sequence | MSNRESHTAI IRLADADRAA STRPHDDINS PVASCPASQA KVFVVPVRYA LAEQAATHSA FQPGVTPQSH AMAARQLRSG FLYVWQRHGP LQRFAVSAQG MLEPQALADN ATAIESGSLS GLALDKLHET WLLYTEQPLD VKHCARLSER EVRQQHMRSI DLREVADALH APHCPPLSAA EQVIAELIPD TFAWAVTIDQ RRNGELNREK TEKLAEVMRR DPSSANINAY VKMTRDNKER ESMTRHYPDA REDDVAPGAW STQPWEALRT QAWLENTRKQ AQGLWSVFAC LDDDLGVLRD INHEQEQVEI AHARWQEDHN LHLGIGGFIR TLVTEEPGEV ASLLKYRYRE RDIQITTAQG QLLLDASQRV DELNKEAVRV SRGRGRQYSR EQADRLIEAL RIKRQEAVEP VKAFIPADLS DEVESVVREY RKEKVSNLEN HHVSAKVGEY IDLPLMNAWL DQTAPDHYQR VEARHTTLYA DRSQFLKRHQ SGTWFVDYTN PAHRLWLDEL AMACLSAQCV RSLGAEQYAE YVRSANSGAL RQLFFAWSPT LEGALNSETR LGELLAALSL ENQDNARQAM AKVLEHLAEP ILSDMSNMAR DATGVWSTLV KRLGAALLLL KSEHTDRLSG AWTTILMAAR LGNEVGTRVI NEGGTRLLQA FGPGINDFVH WVKSTAHAIS IGQVARIVNS PAVQNSGGLA PMVVLLLNTL NTHNYLNQAG ALEKMDEQRI NDTASAALYW GAALVAVLDS QVRKGMGIEV LGRGSAMTPT ITLFGGIIGG LSAAAAFKEF KSLSTQLENS QNSVDPWLEI RQNVVGGQVA AYGAQAIVGI AYTSRALLGI ISVEAATVGF MLWMGPIIWI IALLGVLYLI AWYLQQTPLQ NFLSNCCWSR QRAHDRSPIS QKRQMEELDR LYLILYAPRI SFTAEEEALP ADNRDGITYQ GYIKTLTIDL PGATPNNIRL DLSMIGDPMD YQLWLEIRGA PGLTERPHTV RNMGAHWLRN STCEWIPVAQ GQGLRLTGVF KRIDRELGSL PRSVSLRVRY GTPFTALYGV QGFIGGARGL AFTVTPENGV IALRNDPTPK LDSAQVYKLG EQQCSVFLQP GIRR
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