| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3846 |
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| Symbol | |
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| ID | 1185517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4353903 |
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| End bp | 4354334 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395197 |
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| Product | biopolymer transport protein ExbD/TolR family |
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| Protein accession | NP_793618 |
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| Protein GI | 28870999 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.661546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAATTTC GCCGCCGCAG GCCCCGGGAA AACATCGACA TCAATCTGGT CTCGCTGATC
GACGTGGTGT TCATCCTGCT GCTGTTCTTC ATTGTGACCA CCACCTTCAC CCGTGAAACC
CAATTACGGG TGGACCTGCC GCAGGCCGTC ACCGGTACGC CCGATGTGGA CGCCGCTGCG
AAGCATCTGG ACATCGCCAT CAATGCAGAC GGCATTTTTT CCCTGAACAA CCAGCTCTTG
CCGAAAAACG ATCTGGCGAC CTTGATCGAC GCGCTGCAAC GCGAGTCGGC GGGCGATACC
AGCCTGCCGC TGTCGATCAG TGCAGACGGC AAAACCCCGC ATCAATCGGT CATCACCGCG
ATGGATGCGG CGGGCAAACT GGGGTTCAGT CACCTGCGCA TGACCACTGT CGAGGCCACA
CCGGCTAACT GA
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| Protein sequence | MKFRRRRPRE NIDINLVSLI DVVFILLLFF IVTTTFTRET QLRVDLPQAV TGTPDVDAAA
KHLDIAINAD GIFSLNNQLL PKNDLATLID ALQRESAGDT SLPLSISADG KTPHQSVITA
MDAAGKLGFS HLRMTTVEAT PAN
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