| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3843 |
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| Symbol | kdsB |
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| ID | 1185514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4351944 |
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| End bp | 4352708 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395194 |
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| Product | 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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| Protein accession | NP_793615 |
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| Protein GI | 28870996 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
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| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.801042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGCAG CGTTCACCGT TGTCATCCCG GCGCGTTACG GCTCCAGCCG CTTCCCCGGC
AAACCGCTGA AAACCATTGC TGGCAAACCT ATGGTTCAGC TTGTCTGGGA GCAGGCGCGC
AAAAGCAGTG CCGAGCGCGT GGTGATCGCC ACCGATGATG CGCGCATCGT CGAGGCTTGC
CGCGCATTTG GCGCCGAAGT ATTGCTGACC CGCGATGATC ATAATTCCGG CACCGACCGG
CTGGCTGAGG TGGCCACGCA ACTGGGGCTG GCAGCTAACG CGATTGTGGT CAATGTTCAG
GGCGACGAGC CGCTGATCCC GCCTGCGGTG ATCGATCAGG TGGCGGCCAA TCTGGCGAAG
CATCCCGAGG CTGGCATGGC GACACTGGCC GAGCCCATCG ACGATGTGGC TGCGCTGTTC
AACCCCAATA TCGTCAAGGT CTCGACCGAC ATCAATGGCC TGGCGTTGAC GTTCAGTCGC
GCGCCGTTGC CCTGGGCGCG TGATGCGTTG GCCAGAAGCA AGGACGAGTT GCCTGCAGAC
GTGCCGTATC GTCGTCATAT CGGCATCTAT GCCTACCGTG CGGGCTTTCT GCATGACTTC
GTCAGTTGGG GGCCGTGCTG GCTGGAAAAC ACCGAAAGCC TCGAGCAACT GCGTGCGCTG
TGGAATGGCG TCCGCATCCA CGTCGCCGAT GCACTTGAAG CGCCACCGGG TGGTGTCGAC
ACCCCCGAAG ACCTTGAGCG CGTAAGACGC CTTCTGGAGG CGTGA
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| Protein sequence | MTAAFTVVIP ARYGSSRFPG KPLKTIAGKP MVQLVWEQAR KSSAERVVIA TDDARIVEAC
RAFGAEVLLT RDDHNSGTDR LAEVATQLGL AANAIVVNVQ GDEPLIPPAV IDQVAANLAK
HPEAGMATLA EPIDDVAALF NPNIVKVSTD INGLALTFSR APLPWARDAL ARSKDELPAD
VPYRRHIGIY AYRAGFLHDF VSWGPCWLEN TESLEQLRAL WNGVRIHVAD ALEAPPGGVD
TPEDLERVRR LLEA
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