Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3834 |
Symbol | plsX |
ID | 1185505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4341433 |
End bp | 4342425 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395186 |
Product | fatty acid/phospholipid synthesis protein PlsX |
Protein accession | NP_793607 |
Protein GI | 28870988 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.33282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGGGG ACTTCGGTCC CCGCAACATT GTTCAGGCAA GCCTTGCGTG CCTGACAGCT ACACCCTCGC TGCATCTGGC CCTTGTCGGC CAAGCCTCCC TTATTGAAGA GCTGATTGCC TCCCATGCTG CTGTGGATCG CTCGCGGCTG CGCGTCGTTA ATGCCACTGA AAGCATTGCC ATGGATGAGC GTCCGTCTCA GGCCCTGCGT GGCAAATCCG ATTCTTCCAT GCGTGTTGCC CTTGAGCTTG TCTCCAGTGG TCAGGCCCAG GCATGTGTCA GTGCCGGCAA TACCGGTGCG CTGATGGCGC TGTCCCGCTA CGTGCTCAAG ACCTTGCCCG GGATCGACCG GCCCGCGATG ATCGCGGCCA TTCCTACCCG GACCGGTCAC TGCCAGCTAT TGGACCTGGG CGCGAATGTC GATTGCAGCG CCGAGGCGCT CTATCAGTTC GCGGTGATGG GTTCTGTACT GGCCGAGACG CTGGGCGTTA CAAAGCCCAG GGTTGCCTTG CTCAACGTAG GTACGGAAGA CATCAAGGGC AATCAGCAGG TCAAGCTGGC TGCCGGTCTT TTGCAGGCGG CCGCCGGGCT CAACTACATT GGCTACGTTG AAGGTGACGG GGTGTATCGC GGGGAAGCTG ATGTGGTGGT GTGTGACGGC TTTGTCGGTA ACGTGTTGCT CAAGTCGAGC GAAGGTCTGG CAACGATGAT TGCCGCCAGA ATCGATGCGC TGTTCAATCG CAACTTGCTG AGCAGGGCGG TCGGAGCGCT GGCCTTGCCA TTGCTCAGGC GGCTGCAGAT CGATCTTGCG CCTGCCCGCC ATAACGGTGC AAGTCTGCTC GGATTGCAGG GGGTCGTGGT GAAAAGCCAT GGTTCTGCCA GTGTTTCAGG CTTTCAGAGT GCGATTCAGC GAGCGATCGT CGAATCGCGC GAAGACCTGC CGCAGCGACT GAAGGGGCGT CTTGAAGTGA TGTTCGCGGA CGGACGAACC TGA
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Protein sequence | MGGDFGPRNI VQASLACLTA TPSLHLALVG QASLIEELIA SHAAVDRSRL RVVNATESIA MDERPSQALR GKSDSSMRVA LELVSSGQAQ ACVSAGNTGA LMALSRYVLK TLPGIDRPAM IAAIPTRTGH CQLLDLGANV DCSAEALYQF AVMGSVLAET LGVTKPRVAL LNVGTEDIKG NQQVKLAAGL LQAAAGLNYI GYVEGDGVYR GEADVVVCDG FVGNVLLKSS EGLATMIAAR IDALFNRNLL SRAVGALALP LLRRLQIDLA PARHNGASLL GLQGVVVKSH GSASVSGFQS AIQRAIVESR EDLPQRLKGR LEVMFADGRT
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