Gene PSPTO_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3834 
SymbolplsX 
ID1185505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4341433 
End bp4342425 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content60% 
IMG OID637395186 
Productfatty acid/phospholipid synthesis protein PlsX 
Protein accessionNP_793607 
Protein GI28870988 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.33282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGGG ACTTCGGTCC CCGCAACATT GTTCAGGCAA GCCTTGCGTG CCTGACAGCT 
ACACCCTCGC TGCATCTGGC CCTTGTCGGC CAAGCCTCCC TTATTGAAGA GCTGATTGCC
TCCCATGCTG CTGTGGATCG CTCGCGGCTG CGCGTCGTTA ATGCCACTGA AAGCATTGCC
ATGGATGAGC GTCCGTCTCA GGCCCTGCGT GGCAAATCCG ATTCTTCCAT GCGTGTTGCC
CTTGAGCTTG TCTCCAGTGG TCAGGCCCAG GCATGTGTCA GTGCCGGCAA TACCGGTGCG
CTGATGGCGC TGTCCCGCTA CGTGCTCAAG ACCTTGCCCG GGATCGACCG GCCCGCGATG
ATCGCGGCCA TTCCTACCCG GACCGGTCAC TGCCAGCTAT TGGACCTGGG CGCGAATGTC
GATTGCAGCG CCGAGGCGCT CTATCAGTTC GCGGTGATGG GTTCTGTACT GGCCGAGACG
CTGGGCGTTA CAAAGCCCAG GGTTGCCTTG CTCAACGTAG GTACGGAAGA CATCAAGGGC
AATCAGCAGG TCAAGCTGGC TGCCGGTCTT TTGCAGGCGG CCGCCGGGCT CAACTACATT
GGCTACGTTG AAGGTGACGG GGTGTATCGC GGGGAAGCTG ATGTGGTGGT GTGTGACGGC
TTTGTCGGTA ACGTGTTGCT CAAGTCGAGC GAAGGTCTGG CAACGATGAT TGCCGCCAGA
ATCGATGCGC TGTTCAATCG CAACTTGCTG AGCAGGGCGG TCGGAGCGCT GGCCTTGCCA
TTGCTCAGGC GGCTGCAGAT CGATCTTGCG CCTGCCCGCC ATAACGGTGC AAGTCTGCTC
GGATTGCAGG GGGTCGTGGT GAAAAGCCAT GGTTCTGCCA GTGTTTCAGG CTTTCAGAGT
GCGATTCAGC GAGCGATCGT CGAATCGCGC GAAGACCTGC CGCAGCGACT GAAGGGGCGT
CTTGAAGTGA TGTTCGCGGA CGGACGAACC TGA
 
Protein sequence
MGGDFGPRNI VQASLACLTA TPSLHLALVG QASLIEELIA SHAAVDRSRL RVVNATESIA 
MDERPSQALR GKSDSSMRVA LELVSSGQAQ ACVSAGNTGA LMALSRYVLK TLPGIDRPAM
IAAIPTRTGH CQLLDLGANV DCSAEALYQF AVMGSVLAET LGVTKPRVAL LNVGTEDIKG
NQQVKLAAGL LQAAAGLNYI GYVEGDGVYR GEADVVVCDG FVGNVLLKSS EGLATMIAAR
IDALFNRNLL SRAVGALALP LLRRLQIDLA PARHNGASLL GLQGVVVKSH GSASVSGFQS
AIQRAIVESR EDLPQRLKGR LEVMFADGRT