| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3833 |
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| Symbol | fabD |
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| ID | 1185504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4340378 |
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| End bp | 4341316 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395185 |
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| Product | malonyl CoA-acyl carrier protein transacylase |
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| Protein accession | NP_793606 |
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| Protein GI | 28870987 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.831721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCAT CCCTCGCATT CGTCTTTCCG GGTCAAGGAT CGCAATCACT CGGCATGCTC
GCCGAGCAAG GCGCGCAGCA TCCATTGATC CTCGACACTT TCGAGCAGGC TTCCGAAGCC
CTTGGCTACG ACCTGTGGGC GTTGACCCAA AGCGGTCCGG CCGAGTTGCT CAATCAGACC
GACAAGACCC AGCCTGCCAT TCTGACCGCT TCGATCGCCT TGTGGCATGT ATGGCTGGCC
GAGGGCGGTG CGGTTCCTGC GTTTGTTGCC GGTCACAGCC TGGGTGAATA CAGCGCGCTG
GTTGCTGCGC AAAGCCTTAG CCTGGCCGAT GCCGTGAAGC TCGTCGAGCG CCGCGGCCAG
TTGATGCAGG AAGCTGTGCC AGCCGGTCAG GGCGGCATGG CAGCCATTCT GGGTCTTGAT
GACGCCGACG TCATCGCTGC CTGCGCTGAA GCGGCACAAG GTGAAGTTGT CAGTGCCGTG
AATTTCAACT CGCCGGGTCA GGTGGTCATT GCCGGTTCCG CCGAGGCCGT CAAGCGCGCC
ATGGAGCTGT GCAAGGCGCG AGGCGCCAAG CGTGCCTTGC CGTTGCCGGT CAGCGTGCCA
TCACACTGCG AACTGATGCG TCCTGCTGCA GAGCGTTTCG TCGAGGCGGT CGAAGCCATT
GAATGGCAAG CGCCCTCGAT AGCGTTGGTG CAGAACGTCA GCGCCAGCGC GGTCAGTGAC
CTGGCGACGC TCAAGCGTGA TCTTCTGGAA CAGTTGTACA AGCCGGTTCG CTGGGTTGAA
TCCATTCAAT GTCTGGCGAG CCACGGTGCA ACCCGGCTTG TGGAATGCGG GCCGGGCAAA
GTGCTGGCTG GTCTGAACAA GCGTTGCGCC GAAGGCGTGA TTACTTACAA CCTTGACACC
CCGGACGCCT TTGCCGCCGC ACGCGCGGCA CTGGCCTGA
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| Protein sequence | MSASLAFVFP GQGSQSLGML AEQGAQHPLI LDTFEQASEA LGYDLWALTQ SGPAELLNQT
DKTQPAILTA SIALWHVWLA EGGAVPAFVA GHSLGEYSAL VAAQSLSLAD AVKLVERRGQ
LMQEAVPAGQ GGMAAILGLD DADVIAACAE AAQGEVVSAV NFNSPGQVVI AGSAEAVKRA
MELCKARGAK RALPLPVSVP SHCELMRPAA ERFVEAVEAI EWQAPSIALV QNVSASAVSD
LATLKRDLLE QLYKPVRWVE SIQCLASHGA TRLVECGPGK VLAGLNKRCA EGVITYNLDT
PDAFAAARAA LA
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