Gene PSPTO_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3832 
SymbolfabG 
ID1185503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4339619 
End bp4340362 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content57% 
IMG OID637395184 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionNP_793605 
Protein GI28870986 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.589853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTC AAGGTAAAGT TGCACTGGTA ACCGGTGCCA GTCGCGGTAT TGGTCAAGCC 
ATTGCGCTTG AGTTGGGACG CAATGGTGCG GTCGTTGTAG GCACTGCGAC CTCCGAGTCC
GGCGCCGAGC GCATCAGCGC AACGTTCAAG GAAAGCGGCA TCGAAGGCTT TGGCCTGATG
CTGGATGTCT GCGATGCAGA GTCTGTGAGT TCTGTTCTGT CGACCATTCA GGAGCGCGTA
GGCGCACCGT TGATTCTGGT CAATAATGCC GGTATCACCC GTGATAACCT GGTGATGCGC
ATGAAAGATG ACGAATGGTA CGATGTCGTC AATACCAACC TGAACAGCCT TTTCCGTCTT
TCCAAGGGTG TTCTGCGCGG CATGACCAAA GCGCGTTGGG GACGAATTAT CAGCATTGGT
TCGGTTGTGG GTGCCATGGG CAACGCCGGT CAAGTAAACT ATGCTTCCGC GAAGGCCGGG
CTGGAAGGTT TCAGCAGGGC CTTGGCCCGT GAAGTCGGGT CGCGTGCAGT GACCGTGAAC
TCGGTTGCAC CAGGTTTCAT CGACACCGAC ATGACGCGTG AGCTGCCAGA GGCTCAGCGT
GAATCACTGA TTACCCAGAT ACCCCTGGGC CGTCTGGGGC AGGCAGAAGA GATTGCGCAC
GTAGTCGCTT TTCTTGCTTC CGAAGGCGCA GGTTACGTTA CCGGGGCTAC AATCCCGGTC
AACGGCGGCA TGTACATGAG CTGA
 
Protein sequence
MSLQGKVALV TGASRGIGQA IALELGRNGA VVVGTATSES GAERISATFK ESGIEGFGLM 
LDVCDAESVS SVLSTIQERV GAPLILVNNA GITRDNLVMR MKDDEWYDVV NTNLNSLFRL
SKGVLRGMTK ARWGRIISIG SVVGAMGNAG QVNYASAKAG LEGFSRALAR EVGSRAVTVN
SVAPGFIDTD MTRELPEAQR ESLITQIPLG RLGQAEEIAH VVAFLASEGA GYVTGATIPV
NGGMYMS