| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3820 |
|---|
| Symbol | |
|---|
| ID | 1185491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4329972 |
|---|
| End bp | 4330532 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637395172 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_793593 |
|---|
| Protein GI | 28870974 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.566069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAT CAGGCAAGGC AGGTGATCTG TTTGCGCAGA TCCCCAAAAC CAAGGGGTTG
CCGCCTGTGC ATCTGTGGAA CCCGAATTTC TGTGGCGATA TCGACATGCG TATCGCCCGC
GACGGCACCT GGTACTACCA GGGCACGCCG ATCGGTCGCA AGCCGATGGT CAGGCTGTTC
TCCACCATCA TGCGCCGCGA CGGCGATGAC TATTTCCTGA TTACCCCGGT AGAAAAGGTT
GGCATCAAGG TCGATGACGC GCCGTTTGTC GCGATCAGCC TTGAGGTGCA AGGCGAGGGG
GAAGGGCAGG TGTTGCGTTT TTCGACCAAT GTCGAGGATC AGGCCGAGGC CGGGCCGGAT
CATCTGTTGC GGGTGCTCAT AGACCCCCAC ACTCAGGAAC CGGCACCTTA TATTCATGTG
CGCAACAACC TTGAAGCGCT GATTCATCGC AACGTTTTCT ATCAGATGGT CGAGCTGGCC
GTCTCCCGAG AGCTCGACGG GCAGCAATGG CTGGGCGTCT GGAGTCACGG TGTATTCTTT
CCAATAGGCC TTGAGCCTTG A
|
|---|
| Protein sequence | MTESGKAGDL FAQIPKTKGL PPVHLWNPNF CGDIDMRIAR DGTWYYQGTP IGRKPMVRLF
STIMRRDGDD YFLITPVEKV GIKVDDAPFV AISLEVQGEG EGQVLRFSTN VEDQAEAGPD
HLLRVLIDPH TQEPAPYIHV RNNLEALIHR NVFYQMVELA VSRELDGQQW LGVWSHGVFF
PIGLEP
|
|---|
| |