Gene PSPTO_3813 details

Gene Information

• Locus tag: PSPTO_3813
• ID: 1185484
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 4321146
• End bp: 4321796
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637395166
• Product: hypothetical protein
• Protein accession: NP_793587
• Protein GI: 28870968
• COG category: [S] Function unknown
• COG ID: [COG3147] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTTGC TGGATAACGT AGTCAAGCAG CGAATGGTCG GAGCGCTGGT GCTGATCGCT 
GTTGCGGTCA TCTTCCTGCC GATGCTGTTC ACGCGTGAAG ATGAGACGCG CCAGGTTCAG 
GTCGAAGCGC CTTCGGCTCC TCACGCACCT GCCGTTTCAC AGGTCAAGGT CGATCCTGTG 
CCGGTTCCGG AGCCTCAGGT CCTGCCTCAG GAGCCCGTGC CGGGCGACGC TGACATGGGT 
AGCAACAATC AGCCACCCGC CATGCCGATT GCACCGGCCC CGACTGCACC GGCAACGGCT 
CCTGCATCAA AGCCTGCGGC CAAGCCGACA CCAGCGCCTG CGCCTGCGGC AACTGCGCCC 
GCACCGGCTC CTGCCAAGCC AGCCGCACCT GCCGGGGTAG ATGCCAACGG TCTGTCGATC 
AGTTGGTCGG TTCAACTGGC GAGCATGTCC AATCGAGCCA ATGCCGATAA TCTGCAAAAG 
ACGCTGCGCA CCCAGGGCTA CAACGCCTAT ATCCGTACTG CTGATGGCGT GAACCGGGTG 
TTTGTCGGTC CGTTGATAGA GCGCGCCGAA GCCGATCGCC TGCGTGATCA GCTCGACAAA 
CAGCAGAAGC TCGAGGGTAT TGTGGTGCGC TTCCAGCCTG AACGGGGCTG A 

 

Protein sequence

MALLDNVVKQ RMVGALVLIA VAVIFLPMLF TREDETRQVQ VEAPSAPHAP AVSQVKVDPV 
PVPEPQVLPQ EPVPGDADMG SNNQPPAMPI APAPTAPATA PASKPAAKPT PAPAPAATAP 
APAPAKPAAP AGVDANGLSI SWSVQLASMS NRANADNLQK TLRTQGYNAY IRTADGVNRV 
FVGPLIERAE ADRLRDQLDK QQKLEGIVVR FQPERG