| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3806 |
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| Symbol | ilvA-1 |
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| ID | 1185474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4311900 |
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| End bp | 4313423 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637395156 |
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| Product | threonine dehydratase, biosynthetic |
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| Protein accession | NP_793580 |
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| Protein GI | 28870961 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.276753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATC TGCTCAATCA CTACGCCCGC AAAATCCTCA CCTCGCGCGT CTACGACGTA
GCGGTCGAAA CCCCGCTGCA TGGCGCCCGC CAGCTGTCCG AGCGGCTGGG CAATCAGGTG
CTGCTCAAGC GCGAAGATTT GCAGCCGGTG TTCTCCTTCA AGATTCGCGG CGCGTACAAC
AAGCTCGCCC AATTGACCGC AGAAGAGGCC GCACGCGGCG TGGTCACGGC CTCGGCGGGC
AATCACGCCC AGGGCCTGGC GCTGGCGGCG AAAGAGCTGG GCATTCTGGC CACCATCGTC
ATGCCGCGCA CCACCCCGGA AATCAAGGTC GAAGGGGTGC GTTCCCGCGG TGCCACGGTG
GTGTTGCACG GCGATTCCTT CCCTGAAGCG CTGGCCTATT CGCTGAAACT GGTCGAGCAA
CAAGGCTTCG TCTACATCCA TCCGTATGAC GACCCCGACA CCATTGCCGG GCAAGGCACT
GTGGCGATGG AAATCCTCCG TCAGCAGCCG GGGAAGCTGG ACGCGATCTT TGTGCCGGTC
GGTGGCGGCG GCTTGATTGC AGGGATTGCA GCGTACGTGA AATACCTGCG GCCTGAGATC
AAGGTCATCG GCGTCGAGCC CGACGACTCC AACTGCCTGC AAGCGGCGAT GGCGGCGGGC
GAGCGCGTGG TGTTGAGCCA GGTCGGGCTG TTTGCCGATG GCGTGGCGGT GGCGCAGATC
GGTTATCACA CCTTTGAAGT GTGCCGTCAT TACGTCGATG AAGTGATCAC CGTCAGCACC
GACGAAATCT GCGCGGCGAT CAAGGACATC TACGACGACA CCCGCTCGAT CACCGAGCCT
GCGGGTGCGC TGGGTGTTGC AGGCATCAAG AAGTACGTCG AGCAGCGCGG CGTGACCGGC
CAGACGCTGG TGGCCATCGA CTCCGGCGCC AACGTCAACT TTGACCGCCT GCGCCACGTG
GCCGAGCGTG CCGAACTGGG CGAAGGCCGC GAGGCGATCA TTGCCGTGAC CATTCCCGAG
CAGCCGGGCA GCTTCAAGGC GTTCTGCGAA GCCATCGGCA AGCGCCAGAT CACTGAATTC
AACTACCGCT ACCACACCGA CCGTGAAGCC CATATCTTCG TCGGCGTGCA GACTCACCCG
GAGAACGACC CACGCAGCGC GCTGGTCGCC AGTCTCACCG GGCAGGGTTT TCCGGTGCTG
GACCTGACCG ACAACGAACT GGCCAAACTG CACATCCGCC ACATGGTTGG CGGGCATGCC
GAGCGGGTCA ACGATGAGGT GGTGTTGCGT TTCGAGTTCC CGGAGAGGCC GGGCGCGCTG
TTCAACTTCC TCAACCGGCT GGGCGGGCGC TGGACCATCT CGATGTTCCA CTACCGCAAC
CACGGGGCAG CGGATGGCCG GGTGGTGGCG GGTCTGGTGG TGCCCGAGGA AGAGCGGCAC
CTGGTAGGCG CGGCGCTGGA CGAGATTGGT TATCGGTATT GGGACGAGAG CGAGAACCCG
GCGTATCGGC TGTTTTTGGG CTGA
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| Protein sequence | MTDLLNHYAR KILTSRVYDV AVETPLHGAR QLSERLGNQV LLKREDLQPV FSFKIRGAYN
KLAQLTAEEA ARGVVTASAG NHAQGLALAA KELGILATIV MPRTTPEIKV EGVRSRGATV
VLHGDSFPEA LAYSLKLVEQ QGFVYIHPYD DPDTIAGQGT VAMEILRQQP GKLDAIFVPV
GGGGLIAGIA AYVKYLRPEI KVIGVEPDDS NCLQAAMAAG ERVVLSQVGL FADGVAVAQI
GYHTFEVCRH YVDEVITVST DEICAAIKDI YDDTRSITEP AGALGVAGIK KYVEQRGVTG
QTLVAIDSGA NVNFDRLRHV AERAELGEGR EAIIAVTIPE QPGSFKAFCE AIGKRQITEF
NYRYHTDREA HIFVGVQTHP ENDPRSALVA SLTGQGFPVL DLTDNELAKL HIRHMVGGHA
ERVNDEVVLR FEFPERPGAL FNFLNRLGGR WTISMFHYRN HGAADGRVVA GLVVPEEERH
LVGAALDEIG YRYWDESENP AYRLFLG
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