Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3805 |
Symbol | |
ID | 1185473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4310302 |
End bp | 4311342 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637395155 |
Product | transcriptional regulator, AraC family |
Protein accession | NP_793579 |
Protein GI | 28870960 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.256933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACAT TGACCCTGCG CCTCGGTGAT CTGTCGGTGG GTTTCATCCA GAGCCTGACT GATGCCGTCA TCAGTTTCGA CAAAAACCCT GGCCCGCTGC TGGAGCAATA CGCGCTAGAC CCGACGCGCT TGAGTCAGGC GGGTGCGCGC CTGTCGATCC CGCGCTACAT GCGCCTTGGG CACGCTGCCA TCCAGCTCAC CGGCCAGCCC GGACTGGGCC TGCGCATGGG CCAGCTCAGC CGTTTCGCCC AGGCAGGCCT TGCGGGCGTG ACGGCCGCTC AGGCACCGAC TGTGCGCGAG GCGGCGCGCA CGCTGATACG CTTCGAGCCG CTGTATGGCT CCAACTATCG CGGGCAGTCG AGCTTTCACG AAGATGCCGA AGGCGCGTGG ATGCGCTTTT ACTCCATCAG CCCGTACAAC GCCTACAACC GCTTTGTCGT CGACTCGATT CTGAGCGGCT GGATCGCGCA ACTGGCGACC CTGGCGGGCA CCGAGCTGCG TGCACAGCGC ATTGAAATCG AATTCGACGC ACCTGCCTAT GCAGCGCAAT ACGCAATCCT CAGCGACAGC CCGGTGATGT TTGCGGCGGC CACCAATCAG CTACGTCTCG ATCAGACCAG TCTGGCCTTA CGCAACCCGG ACCATTGTCC GAGTACCTGG CGGCATTTGC TGCAATTGTG CGAAAGGGAG CTGGAGCAAC AGACCCGCAC CCGCAGCCTT CGTGAACGCA TCATTCAATT GCTCGGGCCG CTATTGAACG GCGGGCGGGA ACCGGATCTG GAGGAAGTGG CGGCGCGACT CAAGCTGCCA ACCTGGACAC TGCGCCGCAA GCTGGCCGAG GAAGGCACAC GCTTTCGCGC GGTGCTCAAT GACACACGAC GCGATCTGGC AATGACGTAT ATACGGGACA CAGAACTGGC GTTCGGGGAG ATCGCCTACC TGCTGGGGTT TGCCTCTGCC GAGGCCTTTC AACGCGCCTT TAAACGCTGG AACGGACAGA CTCCGGGAGA GTTCCGCCGC AGCCAGCGCC AAAGCGCCTG A
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Protein sequence | MPTLTLRLGD LSVGFIQSLT DAVISFDKNP GPLLEQYALD PTRLSQAGAR LSIPRYMRLG HAAIQLTGQP GLGLRMGQLS RFAQAGLAGV TAAQAPTVRE AARTLIRFEP LYGSNYRGQS SFHEDAEGAW MRFYSISPYN AYNRFVVDSI LSGWIAQLAT LAGTELRAQR IEIEFDAPAY AAQYAILSDS PVMFAAATNQ LRLDQTSLAL RNPDHCPSTW RHLLQLCERE LEQQTRTRSL RERIIQLLGP LLNGGREPDL EEVAARLKLP TWTLRRKLAE EGTRFRAVLN DTRRDLAMTY IRDTELAFGE IAYLLGFASA EAFQRAFKRW NGQTPGEFRR SQRQSA
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