Gene PSPTO_3805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3805 
Symbol 
ID1185473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4310302 
End bp4311342 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content63% 
IMG OID637395155 
Producttranscriptional regulator, AraC family 
Protein accessionNP_793579 
Protein GI28870960 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.256933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACAT TGACCCTGCG CCTCGGTGAT CTGTCGGTGG GTTTCATCCA GAGCCTGACT 
GATGCCGTCA TCAGTTTCGA CAAAAACCCT GGCCCGCTGC TGGAGCAATA CGCGCTAGAC
CCGACGCGCT TGAGTCAGGC GGGTGCGCGC CTGTCGATCC CGCGCTACAT GCGCCTTGGG
CACGCTGCCA TCCAGCTCAC CGGCCAGCCC GGACTGGGCC TGCGCATGGG CCAGCTCAGC
CGTTTCGCCC AGGCAGGCCT TGCGGGCGTG ACGGCCGCTC AGGCACCGAC TGTGCGCGAG
GCGGCGCGCA CGCTGATACG CTTCGAGCCG CTGTATGGCT CCAACTATCG CGGGCAGTCG
AGCTTTCACG AAGATGCCGA AGGCGCGTGG ATGCGCTTTT ACTCCATCAG CCCGTACAAC
GCCTACAACC GCTTTGTCGT CGACTCGATT CTGAGCGGCT GGATCGCGCA ACTGGCGACC
CTGGCGGGCA CCGAGCTGCG TGCACAGCGC ATTGAAATCG AATTCGACGC ACCTGCCTAT
GCAGCGCAAT ACGCAATCCT CAGCGACAGC CCGGTGATGT TTGCGGCGGC CACCAATCAG
CTACGTCTCG ATCAGACCAG TCTGGCCTTA CGCAACCCGG ACCATTGTCC GAGTACCTGG
CGGCATTTGC TGCAATTGTG CGAAAGGGAG CTGGAGCAAC AGACCCGCAC CCGCAGCCTT
CGTGAACGCA TCATTCAATT GCTCGGGCCG CTATTGAACG GCGGGCGGGA ACCGGATCTG
GAGGAAGTGG CGGCGCGACT CAAGCTGCCA ACCTGGACAC TGCGCCGCAA GCTGGCCGAG
GAAGGCACAC GCTTTCGCGC GGTGCTCAAT GACACACGAC GCGATCTGGC AATGACGTAT
ATACGGGACA CAGAACTGGC GTTCGGGGAG ATCGCCTACC TGCTGGGGTT TGCCTCTGCC
GAGGCCTTTC AACGCGCCTT TAAACGCTGG AACGGACAGA CTCCGGGAGA GTTCCGCCGC
AGCCAGCGCC AAAGCGCCTG A
 
Protein sequence
MPTLTLRLGD LSVGFIQSLT DAVISFDKNP GPLLEQYALD PTRLSQAGAR LSIPRYMRLG 
HAAIQLTGQP GLGLRMGQLS RFAQAGLAGV TAAQAPTVRE AARTLIRFEP LYGSNYRGQS
SFHEDAEGAW MRFYSISPYN AYNRFVVDSI LSGWIAQLAT LAGTELRAQR IEIEFDAPAY
AAQYAILSDS PVMFAAATNQ LRLDQTSLAL RNPDHCPSTW RHLLQLCERE LEQQTRTRSL
RERIIQLLGP LLNGGREPDL EEVAARLKLP TWTLRRKLAE EGTRFRAVLN DTRRDLAMTY
IRDTELAFGE IAYLLGFASA EAFQRAFKRW NGQTPGEFRR SQRQSA