| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3803 |
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| Symbol | fadH |
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| ID | 1185471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4306921 |
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| End bp | 4308960 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395153 |
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| Product | 2,4-dienoyl-CoA reductase |
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| Protein accession | NP_793577 |
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| Protein GI | 28870958 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase
[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0921105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTG CTCACTATCC GCACCTGCTG GCCCCGCTGG ACCTGGGTTT CACGACCTTG
CGCAACCGCA CCCTGATGGG CTCGATGCAC ACCGGGCTTG AAGAGCGGCC GGGTGGCTTC
GAGCGCATGG CGGCCTATTT TGCCGAGCGG GCACGTGGCG GCGTTGGTTT GATGGTGACC
GGTGGCATTG CGCCCAACGA GGAGGGCGGT GTTTACGACG GCGCGGCCAA ACTCACCAAT
GCCCAAGAAG CAGAGCAGCA TCGCATCGTC ACTCAGGCGG TTCACGAGGC CGGCGGCAAG
ATCTGTCTGC AGATACTGCA TGCCGGTCGC TACGCCTACA GCCGCAAGCA GGTTGCGCCG
AGCGCCATTC AGGCCCCGAT CAACCCGTTC ACGCCTCGCG AACTGGATGA AGAGGGCATC
GAAAAGCAGA TCGCCGATTT CGTCAACTGT TCGACCCTGG CCCGAAGTGC CGGGTATGAC
GGCGTCGAAA TCATGGGGTC GGAAGGTTAT TTCATCAATC AGTTCCTCGC CGCCCACACC
AACCACCGCA CTGATCGCTG GGGTGGCAGC TATGAAAACC GCATGCGTCT GGCGGTCGAG
ATCGTGACCC GGGTGCGTGA AGCGGTCAGT GCGGATTTCA TCATCATCTT TCGCCTGTCG
ATGCTGGACC TGGTGGCGGG CGGCAGTTCC TGGCAAGAAA TCGTCCAGTT GGCCAAGGCG
GTCGAGCAGG CGGGTGCGAC GCTGATCAAC ACCGGCATCG GCTGGCATGA AGCGCGAATT
CCGACGATCG CCACCAAGGT GCCGCGCGCG GCATTCAGCA AGGTCACCGC CAAGCTGCGT
GGCTCGGTAA ACGTTCCGCT GATTACCACC AACCGCATCA ACACTGCGGA GGTTGCCGAG
CGCATTCTCA GCGAAGGCGA CGCCGACATG GTCTCGATGG CGCGGCCGTT TCTGGCCGAC
CCTGAGTTCG TCAACAAGGC TGCTGCAGGC CATGCCGAGC GGATCAACAC TTGCATTGGC
TGCAATCAGG CCTGTCTGGA TCACACTTTC GGCGGCAAAC TCACCAGTTG CCTGGTCAAC
CCGCGCGCCT GCCACGAGAC CGAGCTCAAT TACCTGCCTG TTCTGCAAAT CAAGAAGATT
GCCGTGGTGG GCGCAGGTCC CGCCGGTCTG GCTGCGGCAA CGGTGGCCGC ACAACGCGGG
CATGAGGTGA CGCTGTTTGA TTCGGCCAGT GAAATCGGCG GCCAGTTCAA TATCGCCAAG
CGTGTGCCGG GCAAGGAAGA GTTTTCCGAA ACCCTGCGTT ATTTCCGCAA CAAGATGCAG
GAAACCGGCG TGCAGTTGCG CCTCGGCACC CGGGTGAAGG CTCAGGATCT GCTCGGCGCA
GGCTTCGACG AAGTGATTCT GGCCACCGGC ATCGCGCCGC GCACCCCCGC GATCCCCGGC
ATCGACAACC CCAAGGTACT GAGCTATCTG GACGTGATTC TGCAACGCAA ACCGGTCGGG
CGCAGTGTGG CGGTGATCGG TGCGGGCGGT ATCGGTTTTG ATGTGTCGGA GTTTCTCGTG
CATCAGGGCG TGGCCACCAG CCTTGACCGT GACGCATTCT GGAAAGAGTG GGGCATCGAC
ACGACGCTTG AGGCGCGTGG TGGTGTGGCC GGGATCAAGC CTGATGTGCA TGCCCCGGCG
CGCCAGGTGT TTCTGTTGCA ACGCAAGCAC TCCAAGGTCG GCGATGGTCT GGGCAAGACC
ACCGGCTGGA TTCACCGCAC AGGGCTGAAA AACAAGCAGG TGCAGATGCT CAACGGCGTG
CAGTACCTGA AAATCGATGA CGCCGGGTTG CACATTCGCA TTGGCGAAGA CGGTGAAGAA
ACGCTGCTGG CGGTGGACAA CATTGTGATT TGTGCCGGGC AGGACCCGTT GCGCGAACTG
TATGACGATC TGGTCACGGC CGGACAAAGC GTGCACCTGA TCGGCGGGGC GGATGTTGCT
GCCGAACTGG ATGCCAAGCG TGCCATCGAT CAAGGCTCGC GACTGGCCGC TGCGCTCTGA
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| Protein sequence | MTAAHYPHLL APLDLGFTTL RNRTLMGSMH TGLEERPGGF ERMAAYFAER ARGGVGLMVT
GGIAPNEEGG VYDGAAKLTN AQEAEQHRIV TQAVHEAGGK ICLQILHAGR YAYSRKQVAP
SAIQAPINPF TPRELDEEGI EKQIADFVNC STLARSAGYD GVEIMGSEGY FINQFLAAHT
NHRTDRWGGS YENRMRLAVE IVTRVREAVS ADFIIIFRLS MLDLVAGGSS WQEIVQLAKA
VEQAGATLIN TGIGWHEARI PTIATKVPRA AFSKVTAKLR GSVNVPLITT NRINTAEVAE
RILSEGDADM VSMARPFLAD PEFVNKAAAG HAERINTCIG CNQACLDHTF GGKLTSCLVN
PRACHETELN YLPVLQIKKI AVVGAGPAGL AAATVAAQRG HEVTLFDSAS EIGGQFNIAK
RVPGKEEFSE TLRYFRNKMQ ETGVQLRLGT RVKAQDLLGA GFDEVILATG IAPRTPAIPG
IDNPKVLSYL DVILQRKPVG RSVAVIGAGG IGFDVSEFLV HQGVATSLDR DAFWKEWGID
TTLEARGGVA GIKPDVHAPA RQVFLLQRKH SKVGDGLGKT TGWIHRTGLK NKQVQMLNGV
QYLKIDDAGL HIRIGEDGEE TLLAVDNIVI CAGQDPLREL YDDLVTAGQS VHLIGGADVA
AELDAKRAID QGSRLAAAL
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