Gene PSPTO_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3794 
Symbol 
ID1185462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4296666 
End bp4297079 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content54% 
IMG OID637395144 
Producthypothetical protein 
Protein accessionNP_793568 
Protein GI28870949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00747922 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGAAA CGGCAAGGCA GCGGCAAACC GGCACGCAAA GATCCATCGA AAAGACGTTG 
ATTCGCTCAA ATCTCTCGGA ATCGCCTTAC ATACCCGGCA GAGAATATTC TCTAGTTTCG
TCCGTTTTCA ATGCACCAAG GCTCTGTACG AAAAGTCGGC GAGCGAAGGT CAGGCAAGGC
AAAAACAGGC GAGGACGCGG AGTGTTCTTG CCCGTCACTC CCGATACGAC CACAGAGCCG
GTCTGCAATC ACCCGGATCA GATGGCAGAA CTGACCCGTT ACATCGCTGA CGAGATGAAC
CGAAACCTTC TACATCCCAC CGTCCAGAAG TTGAAGAAAC TGCTCAAATA CGACGCTGCG
CAAGAAACCC GACAATGGAT GATGTCCCTG CCGATCAATG GGGAGACGCG CTGA
 
Protein sequence
MGETARQRQT GTQRSIEKTL IRSNLSESPY IPGREYSLVS SVFNAPRLCT KSRRAKVRQG 
KNRRGRGVFL PVTPDTTTEP VCNHPDQMAE LTRYIADEMN RNLLHPTVQK LKKLLKYDAA
QETRQWMMSL PINGETR