Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3794 |
Symbol | |
ID | 1185462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4296666 |
End bp | 4297079 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637395144 |
Product | hypothetical protein |
Protein accession | NP_793568 |
Protein GI | 28870949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00747922 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAAA CGGCAAGGCA GCGGCAAACC GGCACGCAAA GATCCATCGA AAAGACGTTG ATTCGCTCAA ATCTCTCGGA ATCGCCTTAC ATACCCGGCA GAGAATATTC TCTAGTTTCG TCCGTTTTCA ATGCACCAAG GCTCTGTACG AAAAGTCGGC GAGCGAAGGT CAGGCAAGGC AAAAACAGGC GAGGACGCGG AGTGTTCTTG CCCGTCACTC CCGATACGAC CACAGAGCCG GTCTGCAATC ACCCGGATCA GATGGCAGAA CTGACCCGTT ACATCGCTGA CGAGATGAAC CGAAACCTTC TACATCCCAC CGTCCAGAAG TTGAAGAAAC TGCTCAAATA CGACGCTGCG CAAGAAACCC GACAATGGAT GATGTCCCTG CCGATCAATG GGGAGACGCG CTGA
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Protein sequence | MGETARQRQT GTQRSIEKTL IRSNLSESPY IPGREYSLVS SVFNAPRLCT KSRRAKVRQG KNRRGRGVFL PVTPDTTTEP VCNHPDQMAE LTRYIADEMN RNLLHPTVQK LKKLLKYDAA QETRQWMMSL PINGETR
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