Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3784 |
Symbol | |
ID | 1185452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4286749 |
End bp | 4287774 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395134 |
Product | potassium channel protein, putative |
Protein accession | NP_793558 |
Protein GI | 28870939 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.168698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTGC TCCTGTTACT TCGGCGTCAC ACCTCGTCGT TTTTCGAGCG TTTCGGCTGG GCTGGCATCG GCATGCTGTT ACTGGTGCAC TATGGCGTTT CCTGGCTGTT GCTGACGCTG GCCGGTGAAG AGCACCTGTT GCAGGGGGCT GACTTCACTT ATTTCTACCT CACCACTGCG ACCACCGTCG GCTATGGCGA TCTGTCGCCC AAGTCAGGGT GGGGCAAGCT GGTCACCACC ACCTGGATCA TGCTGGGTGG CATTGCCTTG CTGACCACGG TCATCGGCAA GGCGTCGACG TCGGTCGGTG ATATCTGGAG AAGGAACATG AAAGGACAAG GCGATTGCTC GGCGCTGACA GGCCATACAG TGTTGGTTGG CTGGGACGGA GAAGCCAGCG AGCGTATCGT CGAGCTGCTC GGTCAGGACA CCTCTACCAG CCGGGCCGGG CTTGTTATCT GCGACTCGAT CATCACGGAA AACCCGCTGC CGGGCAGGGC GTCGTTCATC AAGGGCGATT CTCTGGATTC GCCGGCGGTG CTGAGCCGCG CGGGGGTTGT GGGCGCGCAG AGAATTCTGG TCCACACCCA ATCCGACAGC CTGACACTCG CCATCGTACT GACGCTCAAA AGCCTCGGGC CGACCGGTCA TGTGGTCGCG CACTTCAATA ATTCCGAACG GGCCGCGCTG GCCAGAACCT ACGCGCCCGA GCTGGAATGC ACCTCGAACA TGGCCATTGA AATGCTGGTT CGCTCCGCGC AGGACCCAGG CTCGAGTTCG GTGATCACCG AGCTGTTGTG TGTTGGCGTG GGTGCCACGC AGTACCGTCA TGTGTTGCCT GCCGACTTCG CCTGCTCCTG CGGCGAGCTG TACATACGCA TGCGCCAGGA ATTCAATGCC ACGCTGATTG GTTATCGCTC CTCAACCATG CAGCAGTTCG AGATCAATCC GGCCAACGAT ATGTCTATCC TGGGCGGGGA AATTTTCTAC ATTGCCTCCA GTCGACTTCA AGGAAACGCA CTATGA
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Protein sequence | MTLLLLLRRH TSSFFERFGW AGIGMLLLVH YGVSWLLLTL AGEEHLLQGA DFTYFYLTTA TTVGYGDLSP KSGWGKLVTT TWIMLGGIAL LTTVIGKAST SVGDIWRRNM KGQGDCSALT GHTVLVGWDG EASERIVELL GQDTSTSRAG LVICDSIITE NPLPGRASFI KGDSLDSPAV LSRAGVVGAQ RILVHTQSDS LTLAIVLTLK SLGPTGHVVA HFNNSERAAL ARTYAPELEC TSNMAIEMLV RSAQDPGSSS VITELLCVGV GATQYRHVLP ADFACSCGEL YIRMRQEFNA TLIGYRSSTM QQFEINPAND MSILGGEIFY IASSRLQGNA L
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