Gene PSPTO_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3784 
Symbol 
ID1185452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4286749 
End bp4287774 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content59% 
IMG OID637395134 
Productpotassium channel protein, putative 
Protein accessionNP_793558 
Protein GI28870939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.168698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTGC TCCTGTTACT TCGGCGTCAC ACCTCGTCGT TTTTCGAGCG TTTCGGCTGG 
GCTGGCATCG GCATGCTGTT ACTGGTGCAC TATGGCGTTT CCTGGCTGTT GCTGACGCTG
GCCGGTGAAG AGCACCTGTT GCAGGGGGCT GACTTCACTT ATTTCTACCT CACCACTGCG
ACCACCGTCG GCTATGGCGA TCTGTCGCCC AAGTCAGGGT GGGGCAAGCT GGTCACCACC
ACCTGGATCA TGCTGGGTGG CATTGCCTTG CTGACCACGG TCATCGGCAA GGCGTCGACG
TCGGTCGGTG ATATCTGGAG AAGGAACATG AAAGGACAAG GCGATTGCTC GGCGCTGACA
GGCCATACAG TGTTGGTTGG CTGGGACGGA GAAGCCAGCG AGCGTATCGT CGAGCTGCTC
GGTCAGGACA CCTCTACCAG CCGGGCCGGG CTTGTTATCT GCGACTCGAT CATCACGGAA
AACCCGCTGC CGGGCAGGGC GTCGTTCATC AAGGGCGATT CTCTGGATTC GCCGGCGGTG
CTGAGCCGCG CGGGGGTTGT GGGCGCGCAG AGAATTCTGG TCCACACCCA ATCCGACAGC
CTGACACTCG CCATCGTACT GACGCTCAAA AGCCTCGGGC CGACCGGTCA TGTGGTCGCG
CACTTCAATA ATTCCGAACG GGCCGCGCTG GCCAGAACCT ACGCGCCCGA GCTGGAATGC
ACCTCGAACA TGGCCATTGA AATGCTGGTT CGCTCCGCGC AGGACCCAGG CTCGAGTTCG
GTGATCACCG AGCTGTTGTG TGTTGGCGTG GGTGCCACGC AGTACCGTCA TGTGTTGCCT
GCCGACTTCG CCTGCTCCTG CGGCGAGCTG TACATACGCA TGCGCCAGGA ATTCAATGCC
ACGCTGATTG GTTATCGCTC CTCAACCATG CAGCAGTTCG AGATCAATCC GGCCAACGAT
ATGTCTATCC TGGGCGGGGA AATTTTCTAC ATTGCCTCCA GTCGACTTCA AGGAAACGCA
CTATGA
 
Protein sequence
MTLLLLLRRH TSSFFERFGW AGIGMLLLVH YGVSWLLLTL AGEEHLLQGA DFTYFYLTTA 
TTVGYGDLSP KSGWGKLVTT TWIMLGGIAL LTTVIGKAST SVGDIWRRNM KGQGDCSALT
GHTVLVGWDG EASERIVELL GQDTSTSRAG LVICDSIITE NPLPGRASFI KGDSLDSPAV
LSRAGVVGAQ RILVHTQSDS LTLAIVLTLK SLGPTGHVVA HFNNSERAAL ARTYAPELEC
TSNMAIEMLV RSAQDPGSSS VITELLCVGV GATQYRHVLP ADFACSCGEL YIRMRQEFNA
TLIGYRSSTM QQFEINPAND MSILGGEIFY IASSRLQGNA L