Gene PSPTO_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3778 
Symbol 
ID1185446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4280584 
End bp4281606 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content61% 
IMG OID637395128 
ProductBNR/Asp-box repeat protein 
Protein accessionNP_793552 
Protein GI28870933 
COG category[R] General function prediction only 
COG ID[COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAGC CTTTCCACTG GCGCACTCGG TTATGCACGG GCATGTCCCT GGTGATCTTT 
ACGTGCTGCT CGTTTGCCGA TTCGGCTCCC GTTGCCGCTG CGGACACCGC CGCGTATGCC
GTCGAATCAG CCAAAGCCTC ACGCGGCCTG TTGCTGGATG TCGCCCATGC CGGTGCACGC
CTGGTCGCAG TGGGTGATCA CGGGCATATT CTGTATTCCG ATGACCAGGG CAAGACCTGG
AGCCAGGCCC GAGTGCCGAC CCGCCAGCTA CTGACGGCGG TGTTCTTCGT CGATGAGCAG
CACGGTTGGG CGGTCGGCCA CGATGCGCAA ATCCTCGCCA GCAGCGATGG CGGCAAAAGC
TGGAACAAAC AGTTCGAGGA CTTGAAGCGC GAAGCACCGT TGCTGGATGT CTGGTTCAAG
GACCTCAACA ACGGTTTCGC CATTGGCGCG TATGGCGCGT TGCTCAACAC CGGCGACGGC
GGCCGGCATT GGCAGGACGT CAGCGACCGG CTGGACAACG AAGACCAGTA CCACCTGAAC
GGTATCGCTC AGATAAAAGA CGCAGGGCTG TTTATCGTCG GTGAAGCGGG CAGCATGTTT
CGTTCTCGCG ACGAGGGGCA AACCTGGGAA AAGCTCGAAG GTCCTTATCA GGGCTCGTTG
TTTGGCGTCG TCGGCACCGC GCAGCCTGCC ACGTTGCTGG CTTACGGTCT GCGCGGCAAC
CTGTTTCGCT CCAGTGATTT TGGTGACACC TGGCAACCCA TCGAACTGAA CGGCGCACGC
GGGCCGGTCG AGTTCGGTCT GGCCAGCGCC ACGTTGCTGA CCGATGGCAC ATTGGTGCTG
GTCGGCAACG GCGGCAGTGT CATGCGCAGC ACTGATGACG GTGAGACATT CGAGGTCTTC
AACCGCCCCG ATCGCATTTC GCTGGCGGGA GTCACCGCTA ATCTTCAAGG CAATCTGATT
CTGGTAGGAC AGGGCGGCGT ACGCGTCACC TCGCCGACGG GCGCCGAGAC GACCCAACAA
TAA
 
Protein sequence
MREPFHWRTR LCTGMSLVIF TCCSFADSAP VAAADTAAYA VESAKASRGL LLDVAHAGAR 
LVAVGDHGHI LYSDDQGKTW SQARVPTRQL LTAVFFVDEQ HGWAVGHDAQ ILASSDGGKS
WNKQFEDLKR EAPLLDVWFK DLNNGFAIGA YGALLNTGDG GRHWQDVSDR LDNEDQYHLN
GIAQIKDAGL FIVGEAGSMF RSRDEGQTWE KLEGPYQGSL FGVVGTAQPA TLLAYGLRGN
LFRSSDFGDT WQPIELNGAR GPVEFGLASA TLLTDGTLVL VGNGGSVMRS TDDGETFEVF
NRPDRISLAG VTANLQGNLI LVGQGGVRVT SPTGAETTQQ