Gene PSPTO_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3774 
Symbol 
ID1185442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4275912 
End bp4276496 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content54% 
IMG OID637395124 
Producthypothetical protein 
Protein accessionNP_793548 
Protein GI28870929 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.801042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTTC TGGCCATCGT CCAGGGCGAT ACCACAGACC ACGGAGGGTC TGTTATCAAT 
GGCGATCAAA CAAAGCGAAT CAATGGTTTC CCCGTAGCGC ACAGGGGCTG TGACGTCATC 
TGTCCACTGC ATGGCGCCAG CAAAATCATC GGCGAAGAAA ACAACTTTCA TATCGAAGGA 
AACATCATCG CCCTGGAGGG CGATCTGACC AGTTGCGGGG CTCGGTTGAT ATCCAGGCAA 
CAGAGTTTCT TTCGGGTTGA GAGGCGGTCG AGTGTTGTGC AGTCTGCGCC TGATACTTCG 
GATGGTAATG ATCAGGGGGT GGCCAGCGAG TGTGTGGTGG ATGGGGGGGT GCAGTCGGTT 
AATTCGTTGG TGGGCCAGCA ACAGCTACCT GACTTCAATG AGCGCTTTCA ATTCACCACT 
CATCAGCACG TCAGTCTTGG GCATATGGGT TATGTGATTT TACAAGACGA TCAGTGCACT 
GCCTGCGGCG CGCTTGATAG CCAAGGCAAT AGCCGAAGCC ACTGCAGCAC AGCGCCCATT 
ACGCTGCAAC CCGCGACATT CGCCCCTTTG CCGATGATGG AGTAA
 
Protein sequence
MKLLAIVQGD TTDHGGSVIN GDQTKRINGF PVAHRGCDVI CPLHGASKII GEENNFHIEG 
NIIALEGDLT SCGARLISRQ QSFFRVERRS SVVQSAPDTS DGNDQGVASE CVVDGGVQSV 
NSLVGQQQLP DFNERFQFTT HQHVSLGHMG YVILQDDQCT ACGALDSQGN SRSHCSTAPI 
TLQPATFAPL PMME