| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3772 |
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| Symbol | |
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| ID | 1185440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4273005 |
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| End bp | 4274747 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395122 |
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| Product | dihydroxy-acid dehydratase, putative |
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| Protein accession | NP_793546 |
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| Protein GI | 28870927 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.204786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGACT CCGATAAAAA ACCGACCCTC CGTTCTGCCC AGTGGTTTGG CACCGCCGAC
AAGAATGGCT TCATGTACCG TAGCTGGATG AAGAATCAGG GTATTGCCGA CCATCAGTTT
CAGGGCAAGC CGATCATCGG CATCTGCAAT ACCTGGTCGG AGCTGACCCC TTGCAACGCG
CATTTCCGGC AGATTGCCGA GCATGTCAAA CGTGGCGTGA TCGAAGCAGG TGGCTGGCCG
GTCGAGTTTC CGGTGTTTTC CAACGGCGAA TCCAACCTGC GCCCCACTGC AATGTTTACC
CGCAACCTGG CGAGTATGGA CGTGGAGGAG GCGATTCGCG GCAACCCGAT TGACGGTGTC
GTGTTGCTGA CCGGCTGTGA CAAGACCACG CCTGCACTGT TGATGGGTGC CGCCAGTTGC
GACATCCCGG CCATCGTCGT GACCGGCGGG CCGATGCTCA ACGGCAAGCA TGAAGGCAAG
GACATCGGTG CCGGCACCAT CGTCTGGCAG ATGCACGAGT CTTACAAAGC CGGGACTATC
AGCCTGGATG AATTCCTCTC CGCCGAAGCC GGCATGTCCC GCTCGGCAGG CACCTGCAAC
ACGATGGGCA CGGCCTCGAC CATGGCCTGC ATGGCTGAAG CACTGGGCAC CTCGTTGCCG
CACAACGCCG CCATTCCTGC GGTGGACTCG CGCCGTTACG TGCTGGCGCA CATGTCCGGC
ATGCGCGCAG TGGACATGGT CCGCGAAGAC TTGCGCCTGT CGAAGATTCT CACCAAGGCC
GCCTTTGAAA ACGCCATCCG GGTCAACGCG GCCATCGGCG GTTCGACCAA TGCAGTTATC
CACCTCAAGG CCATCGCCGG ACGCATTGGC GTCGATCTGG ACCTGGACGA CTGGACCCGC
ATGGGCCGCG GCATGCCGAC CATCGTCGAC CTGCAACCGT CCGGGCGTTT CCTGATGGAA
GAGTTCTATT ACGCCGGTGG CCTGCCCGCC GTGCTGCGCC GCATGAACGA AGCCAGACTG
CTGCCCAACC CGGATGCGTT GACGGTCAAC GGCAAGAGCA TCGGTGAGAA CACCTGCAAT
TCCCCCATCT ATGGTGAAGA TCAGGTAATC CGTGCCTTGG ACAACCCGAT TCGGGCCGAC
GGTGGCATCT GTGTGCTCCG CGGCAACCTC GCCCCGCTGG GTGCCGTGCT CAAGCCGTCG
GCCGCCACGC CGGCACTGAT GCAGCATCGT GGCCGTGCGG TGGTGTTCGA GAATTTCGAA
ATGTACAAGT CGCGGATCAA CGACCCGGAT CTGGACATCG ACGCCAGCTC GGTAATGGTT
CTCAAGAACT GTGGCCCCAA GGGTTATCCG GGTATGGCCG AGGTGGGCAA CATGGGTCTG
CCGGCCAAGC TGCTCGCTCA GGGTGTGACT GACATGGTAC GTATTTCCGA TGCACGCATG
AGCGGCACAG CGTACGGCAC GGTGGTTCTG CATGTCGCTC CGGAAGCGGC CGCCGGTGGC
CCGCTTGCGG TGGTCAAGGA AGGCGACTGG ATCGAGCTTG ACTGCGCCAG CGGCCGTCTG
CATCTGGACA TCCCGGAAGC CGAACTGGCC GCACGCCTGG CGCAATGGCA AGCCCCGCCA
CAATTGTTGC TTGGCGGCTA TCGCCAACTG TATATCGATA AAGTGATGCA GGCCGATCAA
GGCTGTGATT TCGACTTTCT GGTCGGTTGC CGGGGTTCCG AAGTGCCTCG TCACTCGCAC
TAG
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| Protein sequence | MSDSDKKPTL RSAQWFGTAD KNGFMYRSWM KNQGIADHQF QGKPIIGICN TWSELTPCNA
HFRQIAEHVK RGVIEAGGWP VEFPVFSNGE SNLRPTAMFT RNLASMDVEE AIRGNPIDGV
VLLTGCDKTT PALLMGAASC DIPAIVVTGG PMLNGKHEGK DIGAGTIVWQ MHESYKAGTI
SLDEFLSAEA GMSRSAGTCN TMGTASTMAC MAEALGTSLP HNAAIPAVDS RRYVLAHMSG
MRAVDMVRED LRLSKILTKA AFENAIRVNA AIGGSTNAVI HLKAIAGRIG VDLDLDDWTR
MGRGMPTIVD LQPSGRFLME EFYYAGGLPA VLRRMNEARL LPNPDALTVN GKSIGENTCN
SPIYGEDQVI RALDNPIRAD GGICVLRGNL APLGAVLKPS AATPALMQHR GRAVVFENFE
MYKSRINDPD LDIDASSVMV LKNCGPKGYP GMAEVGNMGL PAKLLAQGVT DMVRISDARM
SGTAYGTVVL HVAPEAAAGG PLAVVKEGDW IELDCASGRL HLDIPEAELA ARLAQWQAPP
QLLLGGYRQL YIDKVMQADQ GCDFDFLVGC RGSEVPRHSH
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