Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3764 |
Symbol | |
ID | 1185432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4261462 |
End bp | 4263117 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637395114 |
Product | hypothetical protein |
Protein accession | NP_793538 |
Protein GI | 28870919 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.137041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGCG TGTACACCTT ATTGACCGGC CTGCTGCTCA GCCTGATCGC CTTGTCGTTG CAGGCTGCGC AACTGACGGC CAGCGTTGAC CGCACGCGCC TGAATGCGGG TGAAACGGTC GAGCTAACGC TGGAAACCGA CGACGTCACG CAGTTCGGCA AACCCGATAT GAGCTCACTG GAGGCCAGTT TCGAGGTACG TGATACCCGC CAGCTCAACA GCCTGAAGAC ACTCGACGGC AGCAGCCAGG CCACCACGCG CTGGATCGTC ACGCTGCTGC CACGCGAGAC CGGCAGCGTG ATCATCCCCT CGTTGCAGCT GGGTGAACTG AAAAGCCAGC CCCTGACCTT GCAGGTCATG CAGAGCGAAA CCAAGGAACC AACCAGCCAC CTGGCGTCGA TCTTCATCGA AGCGAGTCTT GATCAGGACA GCGTCTATGT TCAGGCTCAG GCCGTGCTGA CCCTGCGCGT CTATCATTCG GTGTCGCTGT TCGACGACAG CAGCCTGAAC CCCTTGCAAG TGCCGGATGC GCGGGTCGAA AAACTCGGCG ACGCGCGCAC CTACGAAAAG CTCATCAATG GCGTGCGCCA CGGCGTGATA GAGACACGCT ACGCGATTTA CCCGCAGCAA AGCGGCGTGC TTACCATCCC GTCGCAGGTT TTCAGTGCCA CGCTGGTGCA ACCCCCTGCC GAAGCGCAGG GCCAGGAGGC CAATCCGTTC GGCCCGCAAC CGGGCAAATC AGTGCGGGTC AAGTCCGCCG AAGTCCCGCT GACCGTCAAA CCCAAGCCTG CCAACTACCC GGCCGACATC GCCTGGTTGC CAGCGCGCAG CATCAGCCTC GAAGAAAACT GGAGCCCGGA GCCGGGTACC ACTCAGGTCG GCGACTCATT GACCCGAACC ATCACCCTCA AGGCAGAGGG GCTGGCCGGT GCGCAATTGC CGCCGCTTGC GCCGACCGAA GTGCCGAGCC TGCGGCGTTA TCCTGATCAG CCACAATTGC GCAACCTGCC CAGCGAACGG GGCCTGATCG GCACGCGTGA AGAGCGCGAG GCACTGGTAC CCGGTCGTGC CGGAGCAATC GAACTGCCTG CCGTCGAAGT GACCTGGTGG AACACCCGTG AAGACTACCT GGAACACACC AGCCTGCCGG CGCGAACCCT GCAGATCAGC AACAACCCCG GGCTTGCGGT GGACACACCG GTGAGCAATG AGCAAGGCGG TATGACCGTG ATCGGCCCGC CGGTCTGGCC TTGGCAATTG AGCACGTTGC TGTTTGTCTG CACCACCCTG CTGGGCCTTG CGCTGTGGTG GCGGGCGCGT GGGCAACCGG CAATCGCCCG GACCGTGCAG GCCGGGCCGA GCCCGCGTAC CGTGCTGGAT GATCTCAAGC GCGCCTGCCT GGCCAACGAC CCACAAGGGA CCCGTCAGGC ACTCGACGCC TGGGCCCGCC AACAGCCGGA AACCCTGGCC GAAATGGCAG CGCGCTTCGT GCCGCTGTCT GATGCGCTGG ACGGCCTGAA CGGTGCGCTT TATAGCGAAA CCGGCAAGCT GTGGCTGGGC GAAGACCTCT GGCGCGCCGT GCGCAAACTG CCGGCCGCCG AACATATTCA GGACCCGGCA GGCGATGCCG GGTTGCCGCC GCTGTATCCC AAGTGA
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Protein sequence | MSRVYTLLTG LLLSLIALSL QAAQLTASVD RTRLNAGETV ELTLETDDVT QFGKPDMSSL EASFEVRDTR QLNSLKTLDG SSQATTRWIV TLLPRETGSV IIPSLQLGEL KSQPLTLQVM QSETKEPTSH LASIFIEASL DQDSVYVQAQ AVLTLRVYHS VSLFDDSSLN PLQVPDARVE KLGDARTYEK LINGVRHGVI ETRYAIYPQQ SGVLTIPSQV FSATLVQPPA EAQGQEANPF GPQPGKSVRV KSAEVPLTVK PKPANYPADI AWLPARSISL EENWSPEPGT TQVGDSLTRT ITLKAEGLAG AQLPPLAPTE VPSLRRYPDQ PQLRNLPSER GLIGTREERE ALVPGRAGAI ELPAVEVTWW NTREDYLEHT SLPARTLQIS NNPGLAVDTP VSNEQGGMTV IGPPVWPWQL STLLFVCTTL LGLALWWRAR GQPAIARTVQ AGPSPRTVLD DLKRACLAND PQGTRQALDA WARQQPETLA EMAARFVPLS DALDGLNGAL YSETGKLWLG EDLWRAVRKL PAAEHIQDPA GDAGLPPLYP K
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