| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3763 |
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| Symbol | |
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| ID | 1185431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4259747 |
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| End bp | 4261465 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637395113 |
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| Product | TPR domain protein |
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| Protein accession | NP_793537 |
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| Protein GI | 28870918 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.519367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCCG CGCTCTGGCC GCACTGGTTC CGCCCCCAAT GGTTGTTGAT TCTGCCATTG
CTGGCACTGC TGATCTGGCG TCTCTGGCAT CGGCAGAAAC GTGCCGGGCG CTGGCAAACG
CTGCTGCCCA CGCACTTTCA TGCCGTTTTG CTCAATGGCG GGCGAGGCAG CAACAGCAAA
TTGCCGTGGT TCGCGCTGGG GCTGGCCTGG TTGCTGGCAC TGTTCGCCCT GATGGGGCCT
AGCTGGCAGC GCGTCGAGCA AATCAGCCAG AAGCCGGTCG ATCCGCTGGT GGTGATACTC
GAGCTGACCC CGCAGATGCT CGCCACCGAC ACGCCACCGA CGCGCCTTGA ACAGGCCCGG
CGCAAACTGC TGGACCTGTT GCAGAAACGC AGCGACGCGC AAACCGCCAT TGTTGTCTAC
GCAGGCAGCG CGCACACGCT GGTGCCGCTG TCCGACGATC TGGTCACCAG CCATAACCTG
CTTGATGCCA CCAGGCCGTC AATCATGCCC ATGACCGGCC AGCGCGCCGA CCTGGCGGTA
CACAAGGCGC TGACCCTGCT CAAGCAAGGC GCGCTGGGTC AGGGGAGAAT TCTGCTGCTC
ACCTCGTCGC TGAGTGAGCA GGAGCGCCAA GGCATTCGCG AAGCCTTGCG CGGCCAGTCT
CCGCCGTTGC TGATCCTCGG CATCGGCACG GCCGAAGGCG CGCCGGTGAC CCAGGAAAAC
GGCAGCCTGC TCAAGGACGA TCAGGGCGCG ATTCTGGTGC CACGCCTGGA CAGCGCCAGC
CTCAATGACT TCGCCGATCA GGTCGGCGGC AGCTACCGTC AGGCGCGCGG CGACGAAGAA
GACCTGCGCA GCCTCGGGCT GTTGGCCAGC CCTCAGCACG TGCGCAGCGA CGGGCAACTG
GTGCAACTCG ATACCTGGGC CGATCAGGGT CACTGGTTGC TGTTGCCGCT GTTGCTGATC
GCCGCGCTGG CGGGCCGACG CGGCTGGTTG TTCTGTCTGC CGCTGGTGTT CGTGTTTCCG
CAGAACAGCC AGGCGTTCGA GTTTCAGGAC CTGTGGCTGC GCCCCGATCA ACAGGGCCAG
CGGCTGCTGG AACAGCATCG GCCAGCCGAG GCTGCGCAGC GCTTTGACGA TGTGCGCTGG
AAAGGCGTAG CGCTGTACGA AGCGCAGGAT TACGCCAGCG CCGCCCGGCA GTTTGCCCAA
GGCAACAGCG CGACAGACCA CTACAATCGT GGCAATGCGC TGGCGCGCAG TGGTGAGCTG
GAAGCTGCAC TGGATGCCTA CGAACAGGCG CTGGACCGCC AGCCGGAGTT TCCTGCCGCG
CAAGCCAATC GGGCGCTGGT GCAGGGTGTG CTGGATCAGG CCAAGGTGCA AAAGCCTGCG
CAGGACGAGC AAAACAAGGC CGATCAGGGC GAAGAAGGCC AGCAAGCCTC ACAGGACCCG
AACAGCAGCG CGTCGCCAGC CGATGAAAAC CCGTCCCGAA CGGACCAACC CGGCACCAGT
GAAAGCCTGC CGCCGGATAC CAGCGGCCAG GCGGCCTCAG GCTCGGCGAT GGACGACGAA
CACACCACTC GCCCGCCGAC TCCGGGCGCC GACAGCCCGA TCACCGGCGA GCGGCGTCAG
GAGCTGGAGC AGTGGCTGAG GCAGATTCCG GATGATCCGG GCGAACTGCT GAGGCGCAAA
TTCCGCTACG AACAGCAACA TCAGGAAAAG ACCCGATGA
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| Protein sequence | MIAALWPHWF RPQWLLILPL LALLIWRLWH RQKRAGRWQT LLPTHFHAVL LNGGRGSNSK
LPWFALGLAW LLALFALMGP SWQRVEQISQ KPVDPLVVIL ELTPQMLATD TPPTRLEQAR
RKLLDLLQKR SDAQTAIVVY AGSAHTLVPL SDDLVTSHNL LDATRPSIMP MTGQRADLAV
HKALTLLKQG ALGQGRILLL TSSLSEQERQ GIREALRGQS PPLLILGIGT AEGAPVTQEN
GSLLKDDQGA ILVPRLDSAS LNDFADQVGG SYRQARGDEE DLRSLGLLAS PQHVRSDGQL
VQLDTWADQG HWLLLPLLLI AALAGRRGWL FCLPLVFVFP QNSQAFEFQD LWLRPDQQGQ
RLLEQHRPAE AAQRFDDVRW KGVALYEAQD YASAARQFAQ GNSATDHYNR GNALARSGEL
EAALDAYEQA LDRQPEFPAA QANRALVQGV LDQAKVQKPA QDEQNKADQG EEGQQASQDP
NSSASPADEN PSRTDQPGTS ESLPPDTSGQ AASGSAMDDE HTTRPPTPGA DSPITGERRQ
ELEQWLRQIP DDPGELLRRK FRYEQQHQEK TR
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