Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3755 |
Symbol | |
ID | 1185423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4245060 |
End bp | 4245632 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395105 |
Product | hypothetical protein |
Protein accession | NP_793529 |
Protein GI | 28870910 |
COG category | [S] Function unknown |
COG ID | [COG1971] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.190288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAACCCGA TTTCCCTCCT CTTTCTCGCG CTTGCCATGT CCACGGACGC CTTTGCTGCG GCCCTGGGTA AAGGAGCAAG CCTGCACAAA CCGCGCTTTA TCGAAGCGCT TCGTACCGGC CTGATATTCG GCGCCATCGA AACCATCACC CCGGTGATCG GTTGGGGCAT CGGTCAAGTG GCGGCCCGCT TCGCTGAAAG CTGGGACCAC TGGATCGCCT TCACGCTGCT GCTGGTGCTC GGCCTGCACA TGATCTACAA CGGCCTCAAG CATGACCACG AAGAGGAGCA GGAAAAACCC GGCTCACACT CCTTCTGGAT TCTTGCCGTG ACCGCCTTCG CCACCAGTAT CGATGCACTG GCGGTTGGCG TGGGCCTGGC GTTTGTCGAC GTTAATATCA TGGTCGCTGC GCTGGCTATC GGCCTGGCCA CGACCGTAAT GGTTACCATC GGCGTAATGC TCGGTCGCGT ACTCGGCACC ATGGTCGGCA AGCGTGCTGA AATCGTTGGC GGTATCGTGC TGATCGTGGT TGGCACAACA ATTCTGTACG AGCATCTGAC TGCGGCGGCC TGA
|
Protein sequence | MNPISLLFLA LAMSTDAFAA ALGKGASLHK PRFIEALRTG LIFGAIETIT PVIGWGIGQV AARFAESWDH WIAFTLLLVL GLHMIYNGLK HDHEEEQEKP GSHSFWILAV TAFATSIDAL AVGVGLAFVD VNIMVAALAI GLATTVMVTI GVMLGRVLGT MVGKRAEIVG GIVLIVVGTT ILYEHLTAAA
|
| |