| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3747 |
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| Symbol | |
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| ID | 1185415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4234161 |
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| End bp | 4235699 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395097 |
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| Product | drug resistance transporter, EmrB/QacA family |
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| Protein accession | NP_793521 |
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| Protein GI | 28870902 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.659077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAACA ATGCCCCCGC TTCTTTTACT CCGCCCAGCT TGTTGCTCTG CACCATCGGT
CTGTCGCTGG CGACATTCAT GCAGGTGCTC GACACCACGA TTGCCAACGT AGCGCTGCCG
ACCATCGCCG GTAATCTGGG GGTCAGTTCG GAGCAGAGCA CCTGGGTGAT CACCTCGTTC
GCGGTCAGCA ACGCCATTGC CTTGCCGTTG ACCGGCTGGC TCAGCCGTCG CTTTGGCGAG
GTCAAACTGT TCCTGTGGGC CACCATTCTG TTCGTGCTGG CGTCGTTTCT GTGCGGAATC
TCTCAGTCGA TGCCAGAGCT GGTGGGGTTT CGGGCCTTGC AGGGCATGGT TGCCGGGCCG
CTCTATCCGA TGACCCAGAC CCTGCTGATC GCGGTGTACC CGCCTGCAAA GCGGGGGATG
GCGCTGGCGT TGCTGGCGAT GGTCACGGTG GTTGCGCCCA TCGCCGGGCC GATTCTCGGT
GGCTGGATCA CCGACAGTTA CAGTTGGCCA TGGATCTTTT TCATCAACAT CCCGATCGGC
CTGTTCGCCG TGCTGGTGGT GCGCTCGCAG ATGGCTAAAC GGCCGGTAAG CACTGCTCGT
CAACCGCTGG ACTACATTGG CTTGCTGGCC CTGATCGTCG GCGTCGGGTC GCTGCAAGTG
GTGCTCGACA AAGGCAATGA TCTGGACTGG TTCGAGTCGA ATTTCATCCT GTTCGGCTCG
TTGATTTCAC TGGTCGCACT GACGTTTTTC GTGATCTGGG AAATGACCGA CAAGCATCCG
ATCGTCAACC TGCGGCTGTT TGCCTACCGT AACTTTCGTA TTGGTACGCT GGTGATGATC
GGCGGCTATT CGGGGTTTTT CGGCATCAAC CTGATTCTGC CGCAGTGGTT GCAGACACAA
ATGGGTTACA CCGCCACCTG GGCGGGGCTG GCGGTAGCGC CGATCGGCAT TCTGCCGGTA
CTGATGTCGC CGTTTGTCGG CAAGTACGCG CACAAGTTCG ACCTGCGTCT GCTGGCAGGG
CTGGCGTTTC TGGCGATGGG GCTGAGCTGC TTCATGCGTG CCGGTTTCAA CACTGATGTG
GATTTTGAGC ACGTGGCGAT GGTGCAACTG TTCATGGGCA TTGGTGTGGC GCTGTTTTTC
ATGCCGACCT TGAGTATTCT GCTCTCCGAC CTGCCGCCGG ACCAGATCGC CGATGGTTCG
GGGCTGGCGA CATTTCTGCG GACCCTGGGC GGCAGCTTCG CGGCGTCGCT GACCACCTGG
ATCTGGATCC GTCGCGCGAA CCAGCATCAC GCTTACCTGA GCGAAAACAT CAGCACATTC
GACCCCACCA CCCGCCACGC CCTCGACAGT CTTGGCGGCG CCAGCCCACA GGCCTACGCG
CAACTGGAGC GCACCCTCAA CGCCCAGGCC TACATGATGT CCACGGTGGA CTACTTCTAC
CTGCTGGGCT GGATATTCGC GGGCCTGATC CTGCTGGTCT GGCTGGCCAA ACCCCCATTC
GGCGCGAAGG CCGGGCCGGC GGCGGGGGGC GGGCATTGA
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| Protein sequence | MSNNAPASFT PPSLLLCTIG LSLATFMQVL DTTIANVALP TIAGNLGVSS EQSTWVITSF
AVSNAIALPL TGWLSRRFGE VKLFLWATIL FVLASFLCGI SQSMPELVGF RALQGMVAGP
LYPMTQTLLI AVYPPAKRGM ALALLAMVTV VAPIAGPILG GWITDSYSWP WIFFINIPIG
LFAVLVVRSQ MAKRPVSTAR QPLDYIGLLA LIVGVGSLQV VLDKGNDLDW FESNFILFGS
LISLVALTFF VIWEMTDKHP IVNLRLFAYR NFRIGTLVMI GGYSGFFGIN LILPQWLQTQ
MGYTATWAGL AVAPIGILPV LMSPFVGKYA HKFDLRLLAG LAFLAMGLSC FMRAGFNTDV
DFEHVAMVQL FMGIGVALFF MPTLSILLSD LPPDQIADGS GLATFLRTLG GSFAASLTTW
IWIRRANQHH AYLSENISTF DPTTRHALDS LGGASPQAYA QLERTLNAQA YMMSTVDYFY
LLGWIFAGLI LLVWLAKPPF GAKAGPAAGG GH
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