Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3727 |
Symbol | tig |
ID | 1185392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4208965 |
End bp | 4210275 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637395074 |
Product | trigger factor |
Protein accession | NP_793501 |
Protein GI | 28870882 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.267155 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTT CTGTTGAAAA TACTTCCGCT CTTGAGCGCC GCATGACCAT TGGCGTGCCT GCCGAACGCA TCGAGACTGA AGTCAACAAG CGTCTGCAGC AGACTGCACG TAAAGCCAAG ATCCCGGGCT TCCGCCCTGG CAAGGTGCCG ATGAGCGTGA TTCGTCAGCG TTACGAAGAC GGTGCACGCC AGGAAGCACT GGGCGATCTG ATTCAGGCTA CCTTCTATGA AGCTGTCGTC GAGCAAAAGC TGAACCCGGC GGGTGCTCCT GCTGTAGAGC CAAAATCGTT CGAAAAAGGC AAAGATCTGG AATACGTGGC TACTTTTGAA GTATTCCCGG AATTCACCGT CGCCGGTTTC GACACCATCG CCGTAGAACG TCTGTCCGCC GATGTCGCTG ACAGCGATCT GGACAACATG CTGGAAGTGC TGCGCAAGCA GAACGTTCGC TTCGAAGTGG CCGACCGTGC CGCCCAGAAC GAAGACCAGC TGAACATTGA TTTCGAGGGC AAGGTCGACG GCGAAGTATT CGCTGGCGGT TCCGCCACCG CCACCCAGCT GGTTCTGGGT TCCGGCCGCA TGATCCCTGG TTTCGAAGAC GGTCTGGTTG GCGCCAAGGC CGGTGAAGAG CGCGTTCTGA ACGTGACCTT CCCTGAGGAC TATCAGAACC TCGACCTGGC CGGCAAGGCT GCCGAGTTCA CTGTCACCGT CAATACCGTT TCCGAGCCAA AGCTGCCTGA GCTGAACGAA GAGTTCTTCA AGCAGTTCGG CATCAAGGAA ACCGGTATCG AAGGCTTCCG CACCGAAGTT CGCAAGAACA TGGAGCGCGA GCTGCGTCAG GCGATCAAGT CCAAGGTCAA GAATCAGGTC ATGGACGGTC TGCTGGCCGC CAACCCGATC GAAGTGCCTA AAGCGCTGCT GGAAAACGAA GTCAACCGTC TGCGCGTCCA GGCTGTTCAG CAGTTCGGCG GCAACATCAA GCCAGACCAG CTGCCTGCAG AGCTGTTTGA AGAGCAGGCC AAGCGTCGCG TAGAGCTGGG TCTGATCGTT GCCGAGGTTG TCAAGCAGTT CGACCTGAAG CCTGACGATG CTCGCGTTCG TGAAATGATC CAGGAAATGG CGTCCGCCTA TCAGGAACCT GAACAGGTTG TTGCCTGGTA CTACAAGAAC GAGCAGCAAA TGAACGAGGT ACGTTCTGTT GTGCTTGAAG AGCAAGTTGT AGATACTGTT TTGCAGAAAG CTAGCGTGAC CGACAAATCG GTCTCCTACG AAGAAGCTGT CAAGCCGGTG GAAGCTGCAA AAGCCGACTG A
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Protein sequence | MQVSVENTSA LERRMTIGVP AERIETEVNK RLQQTARKAK IPGFRPGKVP MSVIRQRYED GARQEALGDL IQATFYEAVV EQKLNPAGAP AVEPKSFEKG KDLEYVATFE VFPEFTVAGF DTIAVERLSA DVADSDLDNM LEVLRKQNVR FEVADRAAQN EDQLNIDFEG KVDGEVFAGG SATATQLVLG SGRMIPGFED GLVGAKAGEE RVLNVTFPED YQNLDLAGKA AEFTVTVNTV SEPKLPELNE EFFKQFGIKE TGIEGFRTEV RKNMERELRQ AIKSKVKNQV MDGLLAANPI EVPKALLENE VNRLRVQAVQ QFGGNIKPDQ LPAELFEEQA KRRVELGLIV AEVVKQFDLK PDDARVREMI QEMASAYQEP EQVVAWYYKN EQQMNEVRSV VLEEQVVDTV LQKASVTDKS VSYEEAVKPV EAAKAD
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