Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3724 |
Symbol | lon-1 |
ID | 1185389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4204235 |
End bp | 4206631 |
Gene Length | 2397 bp |
Protein Length | 798 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395071 |
Product | ATP-dependent protease La |
Protein accession | NP_793498 |
Protein GI | 28870879 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.639562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACCA CTATTGAATT GCCTCTCTTG CCATTGCGTG ATGTCGTGGT TTATCCGCAC ATGGTTATCC CGCTGTTCGT GGGGCGCGAG AAGTCTATCG AAGCCCTTGA AGCGGCGATG ACAGGCGACA AGCAGATCTT GCTGCTCGCG CAAAGAAACC CGGCTGACGA CGATCCTGAC GAAAAGGCTC TGTACAGCGT CGGCACCATC GCCACCGTAT TGCAGCTGCT CAAACTGCCG GATGGCACCG TCAAGGTGCT GGTTGAAGGT GAGCAGCGAG GTTCGGTGGA GCGTTTCATC GAAGTCGATG GCCATTACCG TGCCGATGTG GCGTTGATCG ACGAAGTCGA TGCGCCAGAC CGCGAATCGG AAGTGTTTGT GCGCAGCCTG CTGGCTCAAT TCGAGCAGTA CGTGCAACTG GGCAAGAAAG TCCCCGCAGA AGTCCTCTCT TCGCTCAACA GCATTGATGA GCCAGGCCGC CTGGTAGACA CCATGGCGGC GCATATGGCG CTGAAAATCG AGCAGAAGCA GGAAATCCTT GAGATTATCG ACCTGTCAGC CCGTGTCGAA CACGTGCTGG CCTTACTGGA TGCCGAAATC GACCTGCTGC AGGTTGAAAA GCGCATCCGC GGTCGCGTGA AAAAGCAAAT GGAGCGCAGC CAGCGCGAGT ACTACCTGAA CGAGCAGATG AAGGCCATTC AGAAAGAACT TGGCGACGGC GACGAAGGCC ACAACGAAAT CGAAGAGCTG AAAAAGCGCA TCGACGCTGC TGGCCTGCCC AAAGACGCTC TGGCCAAGGC AACTGCCGAG CTGAACAAGC TCAAGCAGAT GTCGCCGATG TCGGCCGAGG CGACCGTTGT GCGCACCTAC ATCGACTGGC TGGTTCAAGT GCCGTGGAAG GCGCAGAGCA AAGTTCGCCT GGACCTTGCG CGTGCCGAAG CGATTCTCGA CGCCGACCAT TATGGTCTGG ACGAGGTCAA GGAACGCATC CTTGAATACC TCGCTGTGCA GAAGCGCGTG AAGAAGATTC GTGGTCCTGT GCTGTGTCTG GTAGGGCCTC CAGGTGTGGG TAAAACCTCC CTGGCCGAGT CCATCGCCAA TGCGACCAAT CGCAAATTTG TGCGTATGGC GCTGGGTGGC GTGCGTGACG AGGCTGAAAT CCGGGGTCAT CGCCGTACTT ATATCGGTTC GATGCCAGGA AGATTGATAC AAAAGATGAC AAAGGTGGGC GTTCGCAACC CGCTGTTCCT GCTCGATGAA ATCGACAAGA TGGGCAGCGA CATGCGTGGC GATCCGGCCT CGGCATTGCT TGAGGTTCTG GACCCCGAGC AGAACCACAA TTTCAACGAC CACTACCTTG AAGTCGACTA CGACCTTTCG GATGTGATGT TCCTCTGCAC CTCGAACTCG ATGAACATCC CGCCAGCCTT GCTGGACCGG ATGGAAGTCA TTCGTTTGCC GGGCTACACC GAAGACGAAA AGATCAACAT CGCCGTCAAA TACCTCTCGC CCAAGCAGAT TCAGGCCAAC GGCTTGAAGA AAGGCGAGGT CCAGTTCGAC GAGGCAGCGA TCCGCGACAT CATCCGTTAC TACACCCGGG AAGCGGGCGT GCGCGGGCTT GAGCGCCAGA TTGCCAAGGT CTGCCGTAAG GCGGTCAAAG AACACACGAT GGAAAAACGC TTCTCCGTGC AGGTCACAGC CGAGATGCTG GAACACTTCC TGGGCGTGCG TAAATTCCGT TACGGACTGG CCGAGCAGCA GGATCAGATC GGGCAGGTAA CCGGTTTGGC GTGGACGCAG GTGGGCGGTG AATTGCTGAC CATCGAAGCC GCAGTGGTCT CGGGCAAAGG GCAATTGATC AAGACCGGTT CTCTGGGCGA TGTGATGGTT GAATCGATCA CTGCCGCACA AACCGTGGTA CGCAGCAGGG CCCGTAGCCT GGGCATTCCA GCGGATTTCC ACGAGAAACA CGACACGCAC ATCCACATGC CTGAGGGCGC TACGCCGAAG GACGGCCCGA GCGCCGGTGT GGGCATGTGT ACCGCTCTTG TGTCAGCGCT TACACAGATC CCGGTGCGTG CCGATGTGGC AATGACCGGC GAAATCACCT TGCGCGGGCA GGTTCTGGCG ATTGGTGGCC TGAAGGAAAA ACTGCTCGCT GCACATCGCG GTGGCATCAA GACGGTGATC ATTCCGGAAG AAAACGTGCG TGATTTGAAG GAGATTCCTG ACAACATCAA GCAGGATCTG CAGATCAAGC CCGTTAAATG GATTGACGAA GTCCTGCAAA TTGCGCTGCA ATACGCGCCG GAGCCGTTGC CGGACGTGGC TACTGATCTG GTCGCAAAGG ATGAAAAACG CGAGTCGGAC TCTAAGGATA GAATTAGCAC GCATTAA
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Protein sequence | MKTTIELPLL PLRDVVVYPH MVIPLFVGRE KSIEALEAAM TGDKQILLLA QRNPADDDPD EKALYSVGTI ATVLQLLKLP DGTVKVLVEG EQRGSVERFI EVDGHYRADV ALIDEVDAPD RESEVFVRSL LAQFEQYVQL GKKVPAEVLS SLNSIDEPGR LVDTMAAHMA LKIEQKQEIL EIIDLSARVE HVLALLDAEI DLLQVEKRIR GRVKKQMERS QREYYLNEQM KAIQKELGDG DEGHNEIEEL KKRIDAAGLP KDALAKATAE LNKLKQMSPM SAEATVVRTY IDWLVQVPWK AQSKVRLDLA RAEAILDADH YGLDEVKERI LEYLAVQKRV KKIRGPVLCL VGPPGVGKTS LAESIANATN RKFVRMALGG VRDEAEIRGH RRTYIGSMPG RLIQKMTKVG VRNPLFLLDE IDKMGSDMRG DPASALLEVL DPEQNHNFND HYLEVDYDLS DVMFLCTSNS MNIPPALLDR MEVIRLPGYT EDEKINIAVK YLSPKQIQAN GLKKGEVQFD EAAIRDIIRY YTREAGVRGL ERQIAKVCRK AVKEHTMEKR FSVQVTAEML EHFLGVRKFR YGLAEQQDQI GQVTGLAWTQ VGGELLTIEA AVVSGKGQLI KTGSLGDVMV ESITAAQTVV RSRARSLGIP ADFHEKHDTH IHMPEGATPK DGPSAGVGMC TALVSALTQI PVRADVAMTG EITLRGQVLA IGGLKEKLLA AHRGGIKTVI IPEENVRDLK EIPDNIKQDL QIKPVKWIDE VLQIALQYAP EPLPDVATDL VAKDEKRESD SKDRISTH
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