Gene PSPTO_3722 details

Gene Information

• Locus tag: PSPTO_3722
• ID: 1185387
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 4201727
• End bp: 4203610
• Gene Length: 1884 bp
• Protein Length: 627 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637395069
• Product: peptidyl-prolyl cis-trans isomerase D, putative
• Protein accession: NP_793496
• Protein GI: 28870877
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0760] Parvulin-like peptidyl-prolyl isomerase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.76996
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCAGA ACATCAGGGA CAATTCACAA GGCTGGATTG CCAAGACAAT TATCGGAATC 
ATCATCGCTC TGATGGCCTT CACCGGCATC GAGGCAATGT TTACCGCTAC CAGCAACAAG 
CAGAACGCAG CTGAGGTCAA CGGCGAGGAC ATCACTCAGA ATGAGTTGAG TCAGGCTGTG 
GACATGCAGC GCCGCCAGTT GGCTCAGCAG CTTGCGCAGC AGTTGGGCAA GGATTTCGAT 
CCTGCGATGC TCGACGAAAA ACTGCTGCGT GAATCGGCCC TCAAAGGCCT GATTGATCGC 
AAGCTGCTGC TGCAAGGCGC AGGCGATGCC AGGTTCTCGT TTTCCGACGC CGCACTGGAT 
CAACAGCTGT TGCAGACGCC TGAGTTTCAG GTTGATGGCA AGTTCAGTGC TGACCGATTC 
GACCAGGTGA TTCGTCAGCT CGGTTACAGC CGTATGCAAT TTCGCCAGAT GCTGGGTCAG 
GAAATGCTCA TCGGTCAGGT GCGTGCGGGT GTTGCGGGCA GTGCCTTCGT GACCGACGCA 
CAGGTTGACG CTTTTGCCCG TCTGGAAAAA CAGACGCGTG ATTTCGCTTC GCTGACGCTG 
CCGGCTGATC CTTCTGCAGT CAAAGTGACC GACGACGAAG TCAAGGCTCA CTACGACCAG 
CATGCCAAGG AGTTCATGAG CCCTGAGCAG GTTGTGCTTG ATTACATCGA ATTGAAGAAA 
TCGTCTTTCT TCGACAAGGT GACGGTCAAG GACGAAGACT TGCAGGCGGC CTATCAGAAA 
GAAATCGCCA ACCTGTCGGA ACAGCGTCGT GCTGCACACA TCCTCATCGA AGTGAACGAC 
AAGCTGAACG ACGATCAGGC CAAGGCAAAG GTTGAAGAAA TTCAACAGCG TCTGGCCAAG 
GGTGAGGATT TCGCAGCGCT GGCCAAAGAG TTCTCGCAGG ACCCTGGTTC GTCCAGCAAG 
GGCGGTGATC TTGGGTTTGC AGGTAAGGGC GTCTACGACC CGGCTTTTGA AGAGGCGCTG 
TATGCCTTGA ACAAGGACCA GGTTTCGCAG CCCGTGCGCA CAGACTTCGG CTGGCATTTG 
ATCAAGCTGC TGGGCGTCGA AGCGCCGTCG GTGCCGACCT TTGCCAGCTT AAAAGAAAAG 
CTGAGCAACG ATCTGAAATC GCAGCTGGTC GAGCAGAAGT TTGTCGAAGT GACCAAGCAG 
CTGGAAGATT CTGCATTTGA ATCCTCCGAT CTGACTCAAC CGGCACAAGA CCTGGGTCTG 
AAGGTTCAGA CCACAGCGCC ATTCGGTCGT GAAGGCGGTG AAGGCCTGAC GGCCAACCGC 
GCGGTCATCC AGGCTGCGTT CAGCCCGGAA GTCCTGGAAG AGGGTTCCAA CAGCAACACG 
TTGGAGCTGG ATCCGGAGAC CGTTCTGGTT GTGCGCTCCA AAGAGCACCT GCAACCGCAG 
CAGTTGCCGC TTGAGAGCGT TGCCAGCTCG ATTCGCGCTC AACTGGTCAA GGAGCACGCC 
ACGGCTGCTG CGAAGACCAA GGGCGAGGCT CTGCTGGCCG GACTACGTGA TGGCAAGATC 
CCGTTGGCTG CGAAGCAGGA CGGTCGTGAC TGGAAATCGA TGGAAGCGGT TTCTCGCAGT 
CAGGAAGGTG TTGATCCTCA AGTTCTGCAG GCGCTGTTTC GCATGCCAAA GCCTGTTGCC 
AAGGAAAAGC CGGAATTTGC CAGCATTACC GCAGCCGATG GCAGCTTCGT GATTGTGCGT 
CTCAATGGCG TGAATCAGGC CGCTGCACCG ACTGATGCGG AAAAGGCGCA ATATCGCCGC 
TTCCTCGCGT CGCGTGCCGG TCAGCAGGAT TTCGCGGCCT ACCGTGCACA GTTGGAAAGC 
AAGGCGAAGA TCGAGAAGTT CTAA 

 

Protein sequence

MLQNIRDNSQ GWIAKTIIGI IIALMAFTGI EAMFTATSNK QNAAEVNGED ITQNELSQAV 
DMQRRQLAQQ LAQQLGKDFD PAMLDEKLLR ESALKGLIDR KLLLQGAGDA RFSFSDAALD 
QQLLQTPEFQ VDGKFSADRF DQVIRQLGYS RMQFRQMLGQ EMLIGQVRAG VAGSAFVTDA 
QVDAFARLEK QTRDFASLTL PADPSAVKVT DDEVKAHYDQ HAKEFMSPEQ VVLDYIELKK 
SSFFDKVTVK DEDLQAAYQK EIANLSEQRR AAHILIEVND KLNDDQAKAK VEEIQQRLAK 
GEDFAALAKE FSQDPGSSSK GGDLGFAGKG VYDPAFEEAL YALNKDQVSQ PVRTDFGWHL 
IKLLGVEAPS VPTFASLKEK LSNDLKSQLV EQKFVEVTKQ LEDSAFESSD LTQPAQDLGL 
KVQTTAPFGR EGGEGLTANR AVIQAAFSPE VLEEGSNSNT LELDPETVLV VRSKEHLQPQ 
QLPLESVASS IRAQLVKEHA TAAAKTKGEA LLAGLRDGKI PLAAKQDGRD WKSMEAVSRS 
QEGVDPQVLQ ALFRMPKPVA KEKPEFASIT AADGSFVIVR LNGVNQAAAP TDAEKAQYRR 
FLASRAGQQD FAAYRAQLES KAKIEKF