Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3713 |
Symbol | |
ID | 1185378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4189956 |
End bp | 4190717 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637395060 |
Product | hypothetical protein |
Protein accession | NP_793487 |
Protein GI | 28870868 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.13678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATG AAGCGTTCGC TCAGGCTGAT CCTGAGTGGC TTGCATTGAT CCGCGCTGCC CGTGAATGGC TTTCGGGGCC GTTGGGGCAG CTTCTGCTCG AAGAAGAACG GCGGGTTCTC GACGAAGAGC TGGGGCGTTA TTTCGGCGGT TATCTGGTGC ATTACGGGCC TTCTGCGCAA AACCCGCCCG TGGCCCCTCA GGTGCAGCGC AATGTGCGGC TCGGTGCGCC GTTGCCGGGC GTCGAGATTG TCTGTGAAGA GCAGGCATGG CCCTTGAGCG AGCACGCGGC CGATGTGGTC GTGCTGCAGC ATGGCCTGGA TTTCTGCCTG TCGCCCCACG GTCTGCTACG CGAAGCGGCA AGCAGCGTGC GGCCGGGCGG GCACTTGCTG ATCATCGGTA TCAACCCCTG GAGCGCCTGG GGCGTGCGGC ATGTCTTTGC GCGGGATGCG TTGCGCAAGG CGCGCTGCAT TTCATCGTCG CGGGTCGCCG ACTGGCTGAA CCTGCTGGGC TTCGCGCTGG AGAAACGGCG CTTCGGATGC TATCGTCCGC CCCTTGCTTC AGCAGCATGG CAGTCACGTC TTGCGGGGCT CGAAAGCCTC GGCGAGGGAC GGCAGAGCCC CGGCGGCGGT TTCTATCTTC TGGTCGCGCG CAAGCTGGTG GTAGGTCTGC GGCCGTTGCG TCAGGTGCGC CGCGACCCCA TCGGCAAGCT GATCCCAATG CCCATGGCCA AGGTCAGTCG CAACACTCAG GATTGTTCCT GA
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Protein sequence | MTDEAFAQAD PEWLALIRAA REWLSGPLGQ LLLEEERRVL DEELGRYFGG YLVHYGPSAQ NPPVAPQVQR NVRLGAPLPG VEIVCEEQAW PLSEHAADVV VLQHGLDFCL SPHGLLREAA SSVRPGGHLL IIGINPWSAW GVRHVFARDA LRKARCISSS RVADWLNLLG FALEKRRFGC YRPPLASAAW QSRLAGLESL GEGRQSPGGG FYLLVARKLV VGLRPLRQVR RDPIGKLIPM PMAKVSRNTQ DCS
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