| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3711 |
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| Symbol | dnaQ |
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| ID | 1185376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4188612 |
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| End bp | 4189385 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395058 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | NP_793485 |
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| Protein GI | 28870866 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.295506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGCAAAACC TGGACAACAG ATCGATCGTT CTCGACACCG AAACCACCGG TATGCCAGTG
ACCGATGGTC ACCGTATCGT CGAGATTGGT TGTGTCGAAC TGATTGGCCG CCGCCTGACC
GGGCGGCATT TTCACGTTTA CCTGCAACCC GACCGCGAAA GTGACGAAGG CGCAATCGGT
GTTCACGGCA TCACCAACGA GTTTCTGGTC GGCAAGCCGC GCTTTGCCGA AGTTGCCGAT
GAGTTCTTCG AGTTCATCAA GGGCGCGCAA CTGATCATCC ACAACGCAGC GTTCGACGTT
GGTTTCATCA ACAACGAATT CGCCTTGATG GGTGCGCAGG ACAAGGCCGA CATCACCCGG
CACTGCAAGA TTCTCGACAC CCTGATGATG GCCCGCGAGC GCCATCCGGG GCAGCGCAAC
AGCCTCGATG CGCTGTGCAA ACGCTATGGC GTCGACAACT CGGGTCGTGA GCTGCACGGC
GCTTTGCTCG ACTCCGAGAT TCTGGCCGAC GTCTATCTGG CGATGACCGG CGGGCAGACC
AGCCTGTCGC TGGCCGGCAA CGCCTCGGAT GGCAACGGCT CCGCTGAGGG CTCCGGCAAT
CGCGGCAGCG AAATTCGCCG CTTGCCAGCT GATCGCAAGC CTTGCCGAGT CATTCGTGCC
TCGGAAAGTG AACTGGCCGA GCACGAAGTC CGTATGACCA CCATCGCCAA GGCCACCGGT
GCGCCTGCCC TGTGGGTACA AATGCTGGAA GCCGGGGCAC AGGCCTCTTC CTGA
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| Protein sequence | MQNLDNRSIV LDTETTGMPV TDGHRIVEIG CVELIGRRLT GRHFHVYLQP DRESDEGAIG
VHGITNEFLV GKPRFAEVAD EFFEFIKGAQ LIIHNAAFDV GFINNEFALM GAQDKADITR
HCKILDTLMM ARERHPGQRN SLDALCKRYG VDNSGRELHG ALLDSEILAD VYLAMTGGQT
SLSLAGNASD GNGSAEGSGN RGSEIRRLPA DRKPCRVIRA SESELAEHEV RMTTIAKATG
APALWVQMLE AGAQASS
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