| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3710 |
|---|
| Symbol | |
|---|
| ID | 1185375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4188036 |
|---|
| End bp | 4188590 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637395057 |
|---|
| Product | acetyltransferase, GNAT family |
|---|
| Protein accession | NP_793484 |
|---|
| Protein GI | 28870865 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0456] Acetyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.798515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGG CAAATCCTGC TTTGAGCATT CGGGTTGCAG ACGAATGCTT CGAGGACTAC
ATCCTCAACA GCGAATTTAC CTTTACCGTG CTTGGCTATG CCCAGCCGCG CATTGGCGAA
AGCGTTGACT CATGGCAGGT TGAGCTGGTC GAGCCCTACA GCAAGAATTA CGGTATCGAC
TCTCAGGAGT TCGCCGACCA TCGCGACGCC GCGACCAGCA CGGTGATGGT TGCCTGGCTG
GACGACTGCC CGGTCGGCCA TATCGTGATG AGTACTCACT GGAGCGGCTT CGCCTACATC
GATGAGCTGG CCGTGGACGA GTTGGCGCGG CGGCATGGCG TAGGGCGCTC GTTGCTCGAT
GTCGCTGAGT TCTGGAGTCG CAAGCGCAAT TTGCCGGGCA TCGTTCTGGA AACCCAGAAC
AACAACCTGG GTGCCTGCAG ATTGTACGAA CGTTGTGGCT ACGTGGTGGG CGGGGTGGAT
CACATGCGCT ACAAGGGCAT TGATCCCAAT ACTCGCGAAA CGGCGATTTT CTGGTATCGG
ATCTTTCAGG ACTGA
|
|---|
| Protein sequence | MTVANPALSI RVADECFEDY ILNSEFTFTV LGYAQPRIGE SVDSWQVELV EPYSKNYGID
SQEFADHRDA ATSTVMVAWL DDCPVGHIVM STHWSGFAYI DELAVDELAR RHGVGRSLLD
VAEFWSRKRN LPGIVLETQN NNLGACRLYE RCGYVVGGVD HMRYKGIDPN TRETAIFWYR
IFQD
|
|---|
| |