Gene PSPTO_3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3705 
Symbol 
ID1185370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4179326 
End bp4180423 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content61% 
IMG OID637395052 
Productenoly-CoA hydratase/isomerase family protein 
Protein accessionNP_793479 
Protein GI28870860 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAC AGGTTTCATC CGCCCGCTCG GTTCGACAAC CCGCCAGCCG GGATTCGATC 
GGTGTCGAGG TGCGTAACCA CATCGGTCAC TTGACCCTCA ATCGCCCGGA AGGCCTGAAC
GCAATCGATC TGGACATGGT CCGCACGCTT CGTCAGCAAC TGGATCTGTG GGCTGATGAC
GCGTCTGTTC ATGCGGTGGT TCTGCGTGGC GCAGGCGGCA AGGCGTTCTG CGCCGGGGGC
GACATCCGTT CACTGTATGA AAGCCATAAG AACGGCCAGG ATCTGCATCA GACCTTCTTT
GCTGAAGAAT ACGAGTTGGA CCTGACCATA CACCGCTACC GCAAACCCGT GCTGGCCCTC
ATGGACGGTC TGGTGCTGGG CGGCGGCATG GGACTGGTTC AAGGGGCCGA CCTGCGCGTG
GTGACCGAGC GCAGCCGGCT GGGCATGCCG GAAGTTGCAA TCGGCTACTT TCCGGATGTC
GGCGGCAGCC ACTTCCTCTC CAGGCTGCCA GGCGGGCTGG GCACCTGGCT GGGCGTTACC
GGTTCACAGA TCGGCGCTGC CGATGCGCTG TACTGCGGGC TTGCCAACTG GTCGATGAAC
AGCGAAATGC TGCCGCGCCT GGACCATATG CTTGATCACC TGAAATGGAA ATCGACGCCG
CTCAAGGACC TGCAGGGAGC CTTGGCCAAG CTGGCCACAC AGCGCCTGCC CTACCCGCCC
CTGGAAATAC TGCGCCCGGC CATCGATCAC TTTTTCGGTT TGCCGGACAT CCCCAGCATG
CTCGAACAAC TACAGGAAGT CGTCATCGGC GACACCCGCG AGTGGGCACT GGACACCGTC
AGCCGAATGA AAAGGCATTC GCCGCTGGCC ATGGCCGTAA CCCTGGAAAT GCTCCGCCGT
GGACGCCATC TGTCATTGTC TTCCTGTTTT GCCATGGAGC TGCACCTGGA CCGGCAATGG
TTCGAGCGCG GCGACCTGAT CGAGGGCATT CGCGCCCTGA TCATCGATAA AGACAAGAAG
CCGCAATGGA AACACGCCAG CGAGCAGGAC GTCAGTGCTG CGCATGTGCA GAGTTTCTTC
AGCGGTCTGG AGAATTGA
 
Protein sequence
MSSQVSSARS VRQPASRDSI GVEVRNHIGH LTLNRPEGLN AIDLDMVRTL RQQLDLWADD 
ASVHAVVLRG AGGKAFCAGG DIRSLYESHK NGQDLHQTFF AEEYELDLTI HRYRKPVLAL
MDGLVLGGGM GLVQGADLRV VTERSRLGMP EVAIGYFPDV GGSHFLSRLP GGLGTWLGVT
GSQIGAADAL YCGLANWSMN SEMLPRLDHM LDHLKWKSTP LKDLQGALAK LATQRLPYPP
LEILRPAIDH FFGLPDIPSM LEQLQEVVIG DTREWALDTV SRMKRHSPLA MAVTLEMLRR
GRHLSLSSCF AMELHLDRQW FERGDLIEGI RALIIDKDKK PQWKHASEQD VSAAHVQSFF
SGLEN