| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3696 |
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| Symbol | |
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| ID | 1185361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4166962 |
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| End bp | 4169445 |
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| Gene Length | 2484 bp |
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| Protein Length | 827 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395043 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | NP_793470 |
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| Protein GI | 28870851 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.652711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTCTGC GCGCAGCGCT TGAAGACGCT GGCATCGACG CCGGAGCAGA CGGCGGCCGC
GCCATCGAAG AAACCCGGGA GCGCTATCGA CTGGCCGCGA AGGCGACCAA CGACACCATC
TGGGATTGGG ACTTTGCGGC CAACCATGTG CTTTGGAACG ACGCGCTGGA ACAGGCTTAC
GGCCACCCGC TGGCGACGCT GGACACCTCC GGCGACTGGT GGATTGCGCA GATCCATCCT
GATGACAGGG CGCGCGTCTA CGACTCCATT CATGCAGTGA TCGACGGCGA CGGCACGGCA
TGGAGCGATG AGTACCGTTT TCACCGCCAG GATGGCTCGT ACGCCGACGT TCTTGACCGT
GGCCATGTGA TCCGCGACAG CGAAGGCAAT GCCGTACGCA TGATCGGCGC GATGCTCGAC
ATGTCGCAGA TACGCAAGGC AGAGACCGCG CTGCGCCAAA GCGAAGAGCG CTCCAGAACC
ATGCTGGAAA CCATTGAATC GGCGTTCGCT ATCATTCAGG TCAAATTCGA TGCCGACGAC
AGCCCGATAG ACTATCGCTT TCTGGAGGCA AATCCGGCGT TCGAGCGTCA GGCAGGTGTC
GATCTGCGTG GCAAATGGGT CACCGAGTTC GCGCCGGACC TTGAGCGTTT CTGGTTTGAA
ACCTATGGCC ACGTTGCAAA AACCGGTGAG CCTGCCAGTT TCGAGAACTA TGCCAAGGCG
TTCGAGCGCT GGTTTGAAGT GAAGGCGGTG CGCGTTGGTG AGCCGGCTGA TCGGCAAATC
GCGGTCATGT TCAGCGACGT GACTGCCCGT CGGGATGCCG AAGAGCGTTT ACGGACCAGC
GAGGCCGTCG CCCGCGAAAA CGCTGAGCGA GTGCAGCTGG CCCTGGCCGC TGGCGCGATC
ATCGGTACCT GGCACTGGGA CCTGCCGTCT GATCGCTTTA CGGTCGACGA AGCCTTCGCC
AGGGCTTTTG GCCTTGCCCC TGCGCTGGGC CATGAGGGTT TGAGTCTGGA GCAGGTCATT
GCCACCGTTC ACCCCGAAGA CCGGCCAGGC TTGATCGACG CGATCAACGC CGTCATCACC
CGAGGGCATC TTTACGCCCA TCAGTACCGT GTGCGTCGTA CCGACGGCAT CTACTACTGG
ATAGAGGCGA ACGGCCGGGT TGACCGCGCC GACGATGGCA CACCTTTGAG CTTTCCGGGC
GTGCTTATCA ACGTAGACGA ACGACGCTCC ACTGCCGCCG AGCGCGACCG GGCCACGGCC
GCCTTGCGCA CGCTCAACGA AACACTTGAA CAGCGCGTGG CGGCGCGTAC TGCCGAGCTT
ATGCAGGCTG AAGAAAAGCT GCGCCAATCG CAAAAAATGG AAGCCGTCGG ACAACTGACT
GGCGGTCTCG CCCATGACTT CAATAACCTA CTGGCAGGCA TTTCCGGTGC CCTTGAGCTG
ATGGGCACTC GCATCGAGCA AGGACGCTGG AGCGACGTAG ACAAATACAT CGTGACCGCA
CAGGGTGCTG CCAAACGTGC GGCGGCCCTG ACACACCGGC TGCTCGCCTT CTCCCGGCGC
CAGACGCTGG ATCCGCAGCC GACCGATGTA AACCGACTGA TCAAAGACAT GGCCGATCTG
ATTCAACGCA CGGTTGGCCC CAGCATCGTG GTCGATACGA TCGGTGCCAT AGGCCTCTGG
CCCACGCTGG TGGACGCCAG CCAGCTGGAA AACGCGCTGC TCAATCTGTG TATCAATGCC
CGCGATGCCA TGCCGGATGG CGGGCGCATC ATGGTCGAGG CGAGCAACAT GTGGATGGAG
GGCGATGTGG CCAAGGCCCA CGATATGCCC GATGGGCAGT ATTTGTCGTT GTGCGTGACC
GATACCGGCA CCGGCATGAC GCCGGATGTC ATCGCCAAGG CATTCGACCC CTTCTTCACC
ACCAAACCTA TCGGTCAGGG TACAGGCCTT GGTCTGTCGA TGATTTATGG ATTTGCCAAT
CAGTCAGGCG GGCGGGTGCG CATTCAGTCC GAGGTCGGCA AAGGGACGGC GATCTCCCTC
TATTTACCGC GTTACGACGG TGCCGCCGTC AGGGACGAAC ACGACACCGG CAAGACACCG
GTCGAGTTCA CCGAGTCCGG CGAGACGATC CTGATCGTCG ACGACGAACC GACCGTGCGC
ATGCTGCTCA CTGACGCACT CGGCGATCTC GGCTACACCC TCATCGAGGC ATCCGACAGC
CTGGCCGGCC TCAAATTACT GCGCTCCGAT GTGCATATCG ACCTGTTGAT CACCGACGTG
GGCCTGCCCG GCGGCATGAA CGGGCGGCAA ATGGCCGATG CCGGGCGAGA AGTTCGCCCG
CACCTGAAGA CGCTATTCAT CACCGGCTAC GCAGAAAACG CGGCCATTGG CGATGAGCAA
CTCGGGCCTG GCATGAAAGT GCTGACCAAG CCGTTTGCAA TCGATGTGCT GGCTTCCAGG
GTTCAGGAAT TGATGAACGC GTGA
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| Protein sequence | MRLRAALEDA GIDAGADGGR AIEETRERYR LAAKATNDTI WDWDFAANHV LWNDALEQAY
GHPLATLDTS GDWWIAQIHP DDRARVYDSI HAVIDGDGTA WSDEYRFHRQ DGSYADVLDR
GHVIRDSEGN AVRMIGAMLD MSQIRKAETA LRQSEERSRT MLETIESAFA IIQVKFDADD
SPIDYRFLEA NPAFERQAGV DLRGKWVTEF APDLERFWFE TYGHVAKTGE PASFENYAKA
FERWFEVKAV RVGEPADRQI AVMFSDVTAR RDAEERLRTS EAVARENAER VQLALAAGAI
IGTWHWDLPS DRFTVDEAFA RAFGLAPALG HEGLSLEQVI ATVHPEDRPG LIDAINAVIT
RGHLYAHQYR VRRTDGIYYW IEANGRVDRA DDGTPLSFPG VLINVDERRS TAAERDRATA
ALRTLNETLE QRVAARTAEL MQAEEKLRQS QKMEAVGQLT GGLAHDFNNL LAGISGALEL
MGTRIEQGRW SDVDKYIVTA QGAAKRAAAL THRLLAFSRR QTLDPQPTDV NRLIKDMADL
IQRTVGPSIV VDTIGAIGLW PTLVDASQLE NALLNLCINA RDAMPDGGRI MVEASNMWME
GDVAKAHDMP DGQYLSLCVT DTGTGMTPDV IAKAFDPFFT TKPIGQGTGL GLSMIYGFAN
QSGGRVRIQS EVGKGTAISL YLPRYDGAAV RDEHDTGKTP VEFTESGETI LIVDDEPTVR
MLLTDALGDL GYTLIEASDS LAGLKLLRSD VHIDLLITDV GLPGGMNGRQ MADAGREVRP
HLKTLFITGY AENAAIGDEQ LGPGMKVLTK PFAIDVLASR VQELMNA
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