Gene PSPTO_3695 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3695 
Symbol 
ID1185360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4165817 
End bp4166473 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content54% 
IMG OID637395042 
Producttranscriptional regulator, TetR family 
Protein accessionNP_793469 
Protein GI28870850 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.551475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTGA ACTCCAGCAA TTGCGGTGCA CCACCGGCGG TCAAGCGCCG TCGAATTCCC 
AAAGGCGATC TGCGCAAGGT CGAGATCATT CAGGCCGCCA TGATCATCTT TGCCCGGGAT 
GGATATGCCG GTGCCTCGTT GACGAACATC GCCAAGGTTG CAGGCATCTC TCAAGTCGGT 
TTGTTGCACC ACTTTCCGAA CAAACTTGCG CTGTTACAGG CGGTTCTTGA ACATCGCGAC 
ACGTATGTTG CCTCCCGCCT GCAGGAAGCT GATCAAGACG GTTCACTGCA AGGCTTCATG 
TCTTTTCTGA AATTGGTCAT GAGTTTCAGC ATCGAAGACG CTGCGGTCAG TCAGGCGTTG 
ATGATTATCA ACACGGAAAG TCTGTCGGTC ACTCACCCGG CACATCGTTG GTTCAGCGAA 
CGTTTCGGGA TTGTTCACGG TCATCTTCAG GCTCATCTGA ACGCGTTGAT TCAGGCCGGT 
GAAGTTCGAT CAGACGTTGA TGTAAGGCAG ATCAGCCTTG AGATAGCGGC GATGATGGAC 
GGCATGCAGA TTCAGTGGCT TCGGTCGCCG GGTGATGTGC AGATCGAACA GGCATTTGCC 
AGATTCATCG AGCGACTGGC GCGGGATCTG ACGGGGCGTC AGGCAACCAT TACATGA
 
Protein sequence
MSVNSSNCGA PPAVKRRRIP KGDLRKVEII QAAMIIFARD GYAGASLTNI AKVAGISQVG 
LLHHFPNKLA LLQAVLEHRD TYVASRLQEA DQDGSLQGFM SFLKLVMSFS IEDAAVSQAL 
MIINTESLSV THPAHRWFSE RFGIVHGHLQ AHLNALIQAG EVRSDVDVRQ ISLEIAAMMD 
GMQIQWLRSP GDVQIEQAFA RFIERLARDL TGRQATIT