| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3694 |
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| Symbol | |
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| ID | 1185359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4163440 |
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| End bp | 4165758 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395041 |
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| Product | glycosyl hydrolase, family 3 |
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| Protein accession | NP_793468 |
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| Protein GI | 28870849 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.923315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTTCAC CGGCCATCAA CCTTTACCGG ACGCCGTTCA ACGGGCGGTC AGCCGAGTAC
ATGAGTGGTG AGGATCCGTT CCTCGGCGCG GTCCTGGCGC CGGCAGTCAC CAACGGCATT
CAGGTGCAAG GCGTGCAGGC CGCGGCCAAG CATTACCTGA TGAACGAGCA GGAAGCGAAT
CGGCACTATC TGGATGTGAA AATCGACGAA CGCGCGATGC AGGAGTTGTA TCTGCCCGGC
TTCGAATCGC TGGTCAAGAA CGCCAATATT GCTTCGGTCA TGTGCGGCTA CAACAAGATC
AACGGCGAGT ACGCGTGTGA AAATCATCAT CTCATTACTG ACATCCTGAA AGGCCAATGG
GGCTTCCAGG GCAATGTCAT GAGCGATTTC AACTCGGTCC AGGACGCCTT CAAGGGCGCC
TGGGCAGGCA CTGATATCGA CATGCCGAGC GGGCTCCAGT TTACCGAAGC CAAGCTGCTG
CCTTACGTCT GGAACGGTCA GTTGCATCAG AACGTGATCG ACGACAAGGT CCGCCGCAAC
CTGCGAGCTC TGGTCAGCTA CGGCTTTGAC AAGGGCATCA ACAAGGCCCA GCCGCTTGAG
CATCGCGAAT ACGGCCAACT GGCGGCGCTG AACGTCGCGC GCGAATCGAT AGTGCTGCTG
CGCAATGAGC CGGTAGATGG CCAGAAACCG CTGCTGCCGC TGGCCAGAAG CGCGAAGATC
GCCGTCATTG GCGACATGGC CGTACAACCG CCCTCCGCGC CTTTCGGCAC GGCCTACTCG
GCACCGGCCA GTTATGTCAC CGAAGTGAGC GGGCTCAAGC AACTGGCATC GAATGCATCG
AATGTCGACT ACCTGCCACA GATGAGCCTG AATCCGAAGT CTTCAGTGTG GTATCAGCCA
GGCGACAACA AACAGGCCGT CAGCAACTCA GGCGTCAAAG CCGAGTATTA CGCCAACACC
ACCTTATCGG GCGACCCGGT TGCCAACCGC ATAGAGCCGG GTGTCAATCT GGACTGGACC
ACCAACACCA ACGTGACCGA TAACGGCTCC ACTGCTGTCA GCGGCTACAC GCCTGCGGCC
GGTTCGTTTT CCGCCCGTTT CACCGGCAAG ATCAAACCGA CGATCACCGG CGCCCATGTG
TTCAAGGTCC GTGCCGACGG TGCCTACAAG CTCTGGATCA ATGACGAACT GGTGCTTGAG
GACGAAGGTG CGCAAGTCTC GTTCGATTTG ATTCCGGTCA TTCCCCGCAC CGTTAAAACG
CCAACGCTCA AAGCCGGCAC CGAGTACAAC GTGCGTCTGG AATATCGTCG ACTGAAGGGC
AACTTCATCC CGGTGCTGGG CGGTTTGAAC GGCGTGCAGA TGAGCTGGGC GTCGTTGCGT
CCACCGAAGA ACCTGGCCGA TTACGATGCT GTAGTGGTGG CCGCAGGCAG CAACTTCGAG
TACGAAGGCG AGTCCCTCGA TCACCCGTTT GAACTGCCAC AGTTTCAGTC AGAACTGATC
GGCTTCATTC AGAAAGCCAA CCCGAAAACC ATTGTGGTGA TGCACGGCGG TGGCGGTATG
GACATGCAGC CGTGGGCAGA CAAGGTCGCC GCTTCGTTGC ACGCCTGGTT CCCGGGCCAG
CAAGGTGGCC AGGCGTTGGC CGAGATTCTG TACGGCAAGG TCAACCCATC GGGCAAGCTG
CCTATCACGC TGGATAAAAA AGCGCAGGAC AACCCGAGCT ACGCCTCGTA TTCCAACCCC
GTGCCTTACT ATTTCAGCAG CGCCAACCCG CCCACTGAAA TGACCTACAG CGAAGGCCTG
TATCTGGGCT ACCGCGGTTA CGACAAGAAG CACGCCAAAC CGCTGTACCC GTTTGGTTTC
GGGCTGTCCT ACACCACTTA CCAATACAGC GACCTGAAGC TGTCGAGCAA CGTACTGGCC
CCGGGCGCTA CTCTTCAGGC CAGCTTCAAG GTCACCAACA CGGGCGACAA GGCCGGCTTT
GAAGTTGCTC AGCTTTATGT GCAGCCCTCC AAGCCCCAGG TTGATCGTCC GGAGAAGGAG
CTGAAAGGCT TTTCCAAGGT TTATCTGAAG CCGGGCGAAA GCAAGACGGT GACGATTGCG
CTGGATTCGC GTTCGTTCGC TTATTACTCG GCCGATTCGG TGAGCTGGAA GGTTGACCCT
GGCAAGTTCA AGGTACTGGT GGGCAAGGAC TCGGAAAATC TGCCCCTCGA CCGCACCGTG
GTTGCTCTTT ATCCGGAACA GCTGACCACT CGCGATTCCA ACCCCCTGCC GATACCCCTG
CGCAAGGCAG TTCAGGTACA ACCAGGGCAG GCTTACTAA
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| Protein sequence | MLSPAINLYR TPFNGRSAEY MSGEDPFLGA VLAPAVTNGI QVQGVQAAAK HYLMNEQEAN
RHYLDVKIDE RAMQELYLPG FESLVKNANI ASVMCGYNKI NGEYACENHH LITDILKGQW
GFQGNVMSDF NSVQDAFKGA WAGTDIDMPS GLQFTEAKLL PYVWNGQLHQ NVIDDKVRRN
LRALVSYGFD KGINKAQPLE HREYGQLAAL NVARESIVLL RNEPVDGQKP LLPLARSAKI
AVIGDMAVQP PSAPFGTAYS APASYVTEVS GLKQLASNAS NVDYLPQMSL NPKSSVWYQP
GDNKQAVSNS GVKAEYYANT TLSGDPVANR IEPGVNLDWT TNTNVTDNGS TAVSGYTPAA
GSFSARFTGK IKPTITGAHV FKVRADGAYK LWINDELVLE DEGAQVSFDL IPVIPRTVKT
PTLKAGTEYN VRLEYRRLKG NFIPVLGGLN GVQMSWASLR PPKNLADYDA VVVAAGSNFE
YEGESLDHPF ELPQFQSELI GFIQKANPKT IVVMHGGGGM DMQPWADKVA ASLHAWFPGQ
QGGQALAEIL YGKVNPSGKL PITLDKKAQD NPSYASYSNP VPYYFSSANP PTEMTYSEGL
YLGYRGYDKK HAKPLYPFGF GLSYTTYQYS DLKLSSNVLA PGATLQASFK VTNTGDKAGF
EVAQLYVQPS KPQVDRPEKE LKGFSKVYLK PGESKTVTIA LDSRSFAYYS ADSVSWKVDP
GKFKVLVGKD SENLPLDRTV VALYPEQLTT RDSNPLPIPL RKAVQVQPGQ AY
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