| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3692 |
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| Symbol | |
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| ID | 1185357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4160122 |
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| End bp | 4162290 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395039 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | NP_793466 |
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| Protein GI | 28870847 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGGGC AACAATCGCA ACACCGTATT CGTTTCACTC CTGCCCTGCT GACAATGGGC
ATCTGGATAG CAACCACTCA GGCGGCTTAT GCTGCCGATA CGCAGGGCGC CGAAGCACCG
CCCGCGACGA CCATGGAACT GGGTGCTACC GAAATCAGCA GTGACCAACT CGGCGCCACC
ACCGAGGGCA GTGGTTCCTA CACCACGGGT GCCATGCAGA CGGCTACCAA ATTGCCGCTG
ACCATGCGTG AAACGCCGCA GGCGGTGACC GTCGTCACCC GGCAACGCAT GGACGATCAG
GCCATGACCA GCATCAACGA CGTGGTCAGG TATACGCCCG GTCTGTTCCT CGATCAGTCC
AGCGGGCCCG GCCGTCAAAC CTACACGTCC CGCGGTTTCG ACATCGACAA CATCATGTAC
GACGGCCTGC CCGCCTCCTA CTCGGGCTAT ACGGCAGGCG TGCAGCCCAA TCTGGCCATG
TTCGACCATG TTGAAGTGAT CAGAGGCGCT ACCGGCCTGA CGACAGGCTC TGGCAATCCA
TCGGCAGCTA TCAATATGGT GCGCAAGCGC CCGACCGCCG ATCCGCAGGT CTCCCTCACC
GGCGCTGCCG GCAGTTGGGA CGATTACCGT GGCGTATTCG ACGCCTCCGG CCCACTGAAC
GACAGCCGCA CGGTGCGTGG CCGGATAGTC GGCTCCTACC AGGATGCACA CAGCTTCCGT
GACCAGGAAA AAAGCGATCA CGGCGTGTTC TATGGCGTAA TCGAAGCCGA CCTGACGGAT
GCGACCACGG CGACCTTTGG CCTGTCTCGT CAGGAGGATC AAACCAACTT TTTCTGGGGC
AGCCTGCCGC TTGGCGCCGA TGGCCACCAC CTGAACCTGT CCCGCTCGAC CTACCCCGGC
ACGGACTGGG AAAACAAGAA AATCCAGATC GACACCGTGT TCGGCGAACT TGAACATCGT
TTCGACAACG ACTGGAAACT GCGCGTTGCG GGCTCGAGTT CCACGCTGGA CGGCGTGTTC
TCGGGCACCT ACCTCTCTCG CTACAACGGT CCGCTGGAGA CCACGGCCTA TCAGTCCAGG
CCCGATGAAA AGCAGGCTGC ATTCGATACC TACGCCAGCG GCCCGGTCCA AGCGTTTGGC
CGCACTCATG AAGTGGTGGT CGGCACCAGC AGGCGCGTCT ACGACAAGAC CAGCAAGGAA
TACAGCCCCT ACGACACCGG ACTCCCTATC GGCGCGCCGA AGCCGGACTT TGTCCGCAAC
GGTAAAACTC ACAACATCGC CACCCAGGAC GCAATCTACC TCACCACGCG CCTGAGCCTG
GCGGACCCGT TGACCCTGAT TCTCGGTGGT CGTCTGGACT GGTACGACTA CGACGACCGC
TCAGGCGACG AGGACTTCAA GGTCACCCGC AACCTGACAC GTTACGCGGG CCTGATCTAC
AAACTGGATG ACCAGTACTC CCTGTACGCC AGCTACACCG ATATCTTCAA CCCGCAGAAT
TATCAGGACC TGTCCGGTAA AGTGCTCGAC CCCGTGGTGG GCAAGAACTA TGAGGTCGGT
ATCAAAGGCG AGTATTTCAA CGGCGCTCTC AACGCCAGCC TTGCGGTGTT CCAGATCGAT
CAGGAAAACC TCAAGACCGA AGCGCCAACC CAGGCAGGCT GCGCGGTACT CACTTGCTAC
GATGCCGCAG GCCTGGTGCG CAGTCAGGGC ATCGACATGG AGCTACAGGG TGCGCTGACC
GAGAACTGGC AAGTCGGGGC GGGATACACC TACGCCCGCA CCCACTACCT CAAGGATTTC
GATCCGGCGA AAGAAAATCA GCGCTTCGAC ACCGACACGC CTGAGCATTT GTTCAAATTT
TCGACGGTCT ATCGCCTGCA AGGCGCACTG GAAAAAATGC GCGTTGGCGG CAACGTCTAC
TGGCAGAGCC GCCTGTACAA CGACATTGCC CTTACCGACG CCAGCTACCG TCTGGAACAG
GGCAGTTATG CCGTCGCAGA CTTGATGGCC GGGTATCAGG TGAACAAGCA TCTGGACCTG
CAACTGAACG CCAACAACAT CTTCGACCGT ACCTACTACA CCGCGATTGG CGCCAGCAGT
GTCTGGGGCT CTACCGACGT CTACGGCAAC CCGCGCAGCT ATGCACTGAC GGCGAAGTAT
AGTTTCTGA
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| Protein sequence | MPGQQSQHRI RFTPALLTMG IWIATTQAAY AADTQGAEAP PATTMELGAT EISSDQLGAT
TEGSGSYTTG AMQTATKLPL TMRETPQAVT VVTRQRMDDQ AMTSINDVVR YTPGLFLDQS
SGPGRQTYTS RGFDIDNIMY DGLPASYSGY TAGVQPNLAM FDHVEVIRGA TGLTTGSGNP
SAAINMVRKR PTADPQVSLT GAAGSWDDYR GVFDASGPLN DSRTVRGRIV GSYQDAHSFR
DQEKSDHGVF YGVIEADLTD ATTATFGLSR QEDQTNFFWG SLPLGADGHH LNLSRSTYPG
TDWENKKIQI DTVFGELEHR FDNDWKLRVA GSSSTLDGVF SGTYLSRYNG PLETTAYQSR
PDEKQAAFDT YASGPVQAFG RTHEVVVGTS RRVYDKTSKE YSPYDTGLPI GAPKPDFVRN
GKTHNIATQD AIYLTTRLSL ADPLTLILGG RLDWYDYDDR SGDEDFKVTR NLTRYAGLIY
KLDDQYSLYA SYTDIFNPQN YQDLSGKVLD PVVGKNYEVG IKGEYFNGAL NASLAVFQID
QENLKTEAPT QAGCAVLTCY DAAGLVRSQG IDMELQGALT ENWQVGAGYT YARTHYLKDF
DPAKENQRFD TDTPEHLFKF STVYRLQGAL EKMRVGGNVY WQSRLYNDIA LTDASYRLEQ
GSYAVADLMA GYQVNKHLDL QLNANNIFDR TYYTAIGASS VWGSTDVYGN PRSYALTAKY
SF
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